RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PTPRRQ15256 657 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 MAP9Q49MG5 647 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 RAB41Q5JT25 222 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 RARS2Q5T160 578 aaKnown RBP10.01□□□□□ -0.81
SMPD4-203ENST00000412570 GPR158Q5T848 1215 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 FBXL22Q6P050 247 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 UNC5BQ8IZJ1 945 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 SPPL3Q8TCT6 385 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 FAM136AQ96C01 138 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMPD4-203ENST00000412570 CFAP97Q9P2B7 532 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 AFF4Q9UHB7 1163 aaKnown RBP10.01□□□□□ -0.81
SMPD4-203ENST00000412570 LCMT1Q9UIC8 334 aa10.01□□□□□ -0.81
SMPD4-203ENST00000412570 ANTXRLA6NF34 631 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 E9PAM4 449 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 RNF103O00237 685 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 SSTR1P30872 391 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 VIPR2P41587 438 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 HARS2P49590 506 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 MRPL58Q14197 206 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 BBS12Q6ZW61 710 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 GAREM2Q75VX8 874 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 GET4Q7L5D6 327 aaPredicted RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 HDXQ7Z353 690 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 IPMKQ8NFU5 416 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 FNIP1Q8TF40 1166 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 P2RY11Q96G91 374 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 ZIM3Q96PE6 472 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 RBM15Q96T37 977 aaKnown RBP eCLIP10□□□□□ -0.812e-7■■■■□ 19.9
SMPD4-203ENST00000412570 KLC2Q9H0B6 622 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 ZFP37Q9Y6Q3 630 aaPredicted RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 ZNF840PA6NDX5 716 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 GOLGA8RI6L899 631 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 APOC4-APOC2K7ER74 178 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 LINC01565O15544 149 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 APOC2P02655 101 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 KLKB1P03952 638 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 PRKCGP05129 697 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 AVPR1AP37288 418 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 ZXDBP98169 803 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 BRD3Q15059 726 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 CCNG2Q16589 344 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 LRRC73Q5JTD7 316 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 SLC8B1Q6J4K2 584 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 LRRC31Q6UY01 552 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 CMTR2Q8IYT2 770 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 EPS8L3Q8TE67 593 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 ARL8AQ96BM9 186 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 TM6SF2Q9BZW4 377 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 MUC3BQ9H195 1237 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 ETNK1Q9HBU6 452 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 NT5MQ9NPB1 228 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 MAN1A1P33908 653 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 RFC2P35250 354 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 SEPT6Q14141 434 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 EFTUD2Q15029 972 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■■ 35.4
SMPD4-203ENST00000412570 ACCSLQ4AC99 568 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 STRADAQ7RTN6 431 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 NIPA2Q8N8Q9 360 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 TFB1MQ8WVM0 346 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 MRPS31Q92665 395 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 SLC2A13Q96QE2 648 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 MTRF1LQ9UGC7 380 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 TSR3Q9UJK0 312 aaKnown RBP10□□□□□ -0.81
SMPD4-203ENST00000412570 NEU2Q9Y3R4 380 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 VPS13AQ96RL7 3174 aa10□□□□□ -0.81
SMPD4-203ENST00000412570 GOLGA4Q13439 2230 aaKnown RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 ZNF638Q14966 1978 aaKnown RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 TMEM189-UBE2V1I3L0A0 370 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 TMEM63AO94886 807 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 HMGA1P17096 107 aaKnown RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SLC6A4P31645 630 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 GKP32189 559 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 PPM1AP35813 382 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 HSD17B3P37058 310 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 TMPRSS15P98073 1019 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SLC5A9Q2M3M2 681 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 C1orf53Q5VUE5 145 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 PDZD4Q76G19 769 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 ELMOD1Q8N336 334 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 PSMG2Q969U7 264 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SNF8Q96H20 258 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 CALR3Q96L12 384 aaKnown RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 ZSWIM3Q96MP5 696 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SERPINB11Q96P15 392 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 PAIP2Q9BPZ3 127 aaKnown RBP9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SLC39A8Q9C0K1 460 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 BRD8Q9H0E9 1235 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 LINC00597Q9H2U6 94 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 GRHL1Q9NZI5 618 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 SHROOM3Q8TF72 1996 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 C2orf71A6NGG8 1288 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 H0Y626 953 aa9.99□□□□□ -0.81
SMPD4-203ENST00000412570 CAMK1Q14012 370 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms