RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KRBA2Q6ZNG9 492 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 RTL10Q7L3V2 364 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF720Q7Z2F6 126 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 LIMS2Q7Z4I7 341 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 CD302Q8IX05 232 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 AOPEPQ8N6M6 819 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 PDILTQ8N807 584 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 TRIML1Q8N9V2 468 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MNS1Q8NEH6 495 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 BEST2Q8NFU1 509 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF461Q8TAF7 563 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 RUBCNQ92622 972 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 GOLGA1Q92805 767 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 HVCN1Q96D96 273 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 DNAJC19Q96DA6 116 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 FCRL3Q96P31 734 aaPredicted RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 TSPAN18Q96SJ8 248 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 PRRX2Q99811 253 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MFSD1Q9H3U5 465 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ST6GALNAC4Q9H4F1 302 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MRPL44Q9H9J2 332 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 TRMT1Q9NXH9 659 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 TBC1D7Q9P0N9 293 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 IFNKQ9P0W0 207 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 EPS15L1Q9UBC2 864 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SEL1LQ9UBV2 794 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 RSPH14Q9UHP6 348 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 FBXL5Q9UKA1 691 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 CPSF3Q9UKF6 684 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 AGO2Q9UKV8 859 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 DUSP12Q9UNI6 340 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 PPP2R2CQ9Y2T4 447 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 RRP15Q9Y3B9 282 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZFP37Q9Y6Q3 630 aaPredicted RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 A0A087WUV0 522 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 A0A087X0B3 334 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ARHGEF37A1IGU5 675 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 WDR27A2RRH5 827 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 NPEPPSL1A6NEC2 478 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SRRM3A6NNA2 597 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 VGLL3A8MV65 326 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 H0Y8X5 98 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 M0QZQ0 153 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PPEF2O14830 753 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SPTLC2O15270 562 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 NARSO43776 548 aaKnown RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SHOX2O60902 331 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ABLIM3O94929 683 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF202O95125 648 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 GCNT3O95395 438 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SEC24AO95486 1093 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 IDEP14735 1019 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF18P17022 549 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PTPN2P17706 415 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ACOT2P49753 483 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 MYL5Q02045 173 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 NHLH1Q02575 133 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 YWHAHQ04917 246 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ALCAMQ13740 583 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 POSTNQ15063 836 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SMN1Q16637 294 aaKnown RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PABPC1LQ4VXU2 614 aaKnown RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SPATA1Q5VX52 437 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 TPGS2Q68CL5 300 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 FBXL19Q6PCT2 694 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 DSTYKQ6XUX3 929 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 USP37Q86T82 979 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CIR1Q86X95 450 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CCDC65Q8IXS2 484 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 EFCAB13Q8IY85 973 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SYCP3Q8IZU3 236 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CNPY4Q8N129 248 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SLC44A3Q8N4M1 653 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 FSIP1Q8NA03 581 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 TXNDC5Q8NBS9 432 aaKnown RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PRSS33Q8NF86 280 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ST13P5Q8NFI4 369 aaPredicted RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 SPATA20Q8TB22 786 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ITFG1Q8TB96 612 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 FAM71BQ8TC56 605 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 POMGNT1Q8WZA1 660 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 FGF13Q92913 245 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ACCSQ96QU6 501 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 GORASP1Q9BQQ3 440 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CARD6Q9BX69 1037 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 STRA6Q9BX79 667 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 IKZF4Q9H2S9 585 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 DEF6Q9H4E7 631 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ASB7Q9H672 318 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 WDR26Q9H7D7 661 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CYP4F11Q9HBI6 524 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 ST7Q9NRC1 585 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 OLFML3Q9NRN5 406 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PANK4Q9NVE7 773 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 HCFC1R1Q9NWW0 138 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 PPP4R1LQ9P1A2 415 aa5.63□□□□□ -1.51
LINC00342-201ENST00000412393 DNMT3BQ9UBC3 853 aaKnown RBP5.63□□□□□ -1.51
LINC00342-201ENST00000412393 CDC23Q9UJX2 597 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms