RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 FOXD2O60548 495 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 USO1O60763 962 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 SLC3A2P08195 630 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 PEPDP12955 493 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 SFPQP23246 707 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 NDUFS1P28331 727 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 MPLP40238 635 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 ARL1P40616 181 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 AGTR2P50052 363 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CCT8P50990 548 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CCR9P51686 369 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 MVDP53602 400 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CLNS1AP54105 237 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 DGCR2P98153 550 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 GPR162Q16538 588 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 NFIL3Q16649 462 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 TSTQ16762 297 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 SPATS1Q496A3 300 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 RUNDC3AQ59EK9 446 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 PCID2Q5JVF3 399 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 FNDC7Q5VTL7 733 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 H1FNTQ75WM6 255 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 ZMIZ2Q8NF64 920 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 NFKBIDQ8NI38 313 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 MMS19Q96T76 1030 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CD180Q99467 661 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CHCHD6Q9BRQ6 235 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 ADGRE3Q9BY15 652 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 SFXN1Q9H9B4 322 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 PLEKHA5Q9HAU0 1116 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 THAP1Q9NVV9 213 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 BEX4Q9NWD9 120 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 ORC3Q9UBD5 711 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 SLC25A10Q9UBX3 287 aaPredicted RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 CNPY2Q9Y2B0 182 aa4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 REXO2Q9Y3B8 237 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 LAS1LQ9Y4W2 734 aaKnown RBP4.47□□□□□ -1.69
RNU2-28P-201ENST00000410457 NPIPB13A6NJU9 1138 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 NPIPB5A8MRT5 1133 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 NPIPB4C9JG80 1138 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 K7ENM7 598 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PRYO14603 147 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 TSPAN4O14817 238 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ZBED4O75132 1171 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 KAT7O95251 611 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 MAKP20794 623 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 DRD4P21917 467 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PRPH2P23942 346 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PRKCHP24723 683 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ADRA1BP35368 520 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 HOXD12P35452 270 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 STAT6P42226 847 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PAFAH1B1P43034 410 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 RPS6KA3P51812 740 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ALKBH1Q13686 389 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 KRT32Q14532 448 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SEC23BQ15437 767 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 CNGA3Q16281 694 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 LSM12Q3MHD2 195 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 TMTC3Q6ZXV5 915 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 FASTKD5Q7L8L6 764 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 R3HCC1LQ7Z5L2 792 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 GALNT7Q86SF2 657 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ADGRF3Q8IZF5 1079 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ZNF366Q8N895 744 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ANKRD52Q8NB46 1076 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 MAFAQ8NHW3 353 aaPredicted RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 RFWD2Q8NHY2 731 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SNRNP27Q8WVK2 155 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 RNFT2Q96EX2 444 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ZNF845Q96IR2 970 aaPredicted RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 HIC2Q96JB3 615 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PDLIM2Q96JY6 352 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 BBC3Q96PG8 261 aaPredicted RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 CIPCQ9C0C6 399 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 INTS2Q9H0H0 1204 aaKnown RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 CYP4F11Q9HBI6 524 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 ALKBH4Q9NXW9 302 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 HCN3Q9P1Z3 774 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 OSGIN2Q9Y236 505 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 B3GNT3Q9Y2A9 372 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SIRT4Q9Y6E7 314 aaPredicted RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 EPN1Q9Y6I3 576 aaPredicted RBP4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SPATA31A5Q5VU36 1347 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 SPATA31A7Q8IWB4 1347 aa4.46□□□□□ -1.7
RNU2-28P-201ENST00000410457 PI4KAP2A4QPH2 592 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 BTBD19C9JJ37 291 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 H7C1Q1 480 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 TNPO2O14787 897 aaKnown RBP4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 FYB1O15117 783 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 PDE8BO95263 885 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 SCGB1D1O95968 90 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 MT-CO3P00414 261 aa4.45□□□□□ -1.7
RNU2-28P-201ENST00000410457 ELFN1P0C7U0 828 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms