RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ILDR2Q71H61 639 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 EID3Q8N140 333 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 KANSL1LA0AUZ9 987 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 MANSC4A6NHS7 340 aaPredicted RBP11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 C4orf22Q6V702 233 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 FAM120BQ96EK7 910 aaKnown RBP11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 NEK6Q9HC98 313 aa11.46□□□□□ -0.58
PRPF40A-202ENST00000410080 RBM22Q9NW64 420 aaKnown RBP eCLIP11.46□□□□□ -0.583e-7■■■■■ 27.7
PRPF40A-202ENST00000410080 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ATG7O95352 703 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TLX1P31314 330 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 FMO4P31512 558 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 RPL4P36578 427 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 CASP4P49662 377 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TAF5Q15542 800 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ACER1Q8TDN7 264 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TTLL2Q9BWV7 592 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ASAH2Q9NR71 780 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 PRG2P13727 222 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 RPA3P35244 121 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 NAMPTP43490 491 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 CCL23P55773 120 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 PKN1Q16512 942 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 C11orf63Q6NUN7 778 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ULK3Q6PHR2 472 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SERPINA13PQ6UXR4 307 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ERP27Q96DN0 273 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 FDXACB1Q9BRP7 624 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 HTATIP2Q9BUP3 242 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 DNAJC11Q9NVH1 559 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ABHD14A-ACY1A0A1B0GW23 586 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 JCHAINP01591 159 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 BDNFP23560 247 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 HNF4AP41235 474 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 STK4Q13043 487 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 GPATCH2LQ9NWQ4 482 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 CDH16O75309 829 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TMED10P49755 219 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 MDM1Q8TC05 714 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 FAR1Q8WVX9 515 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 GFM2Q969S9 779 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 RNF19AQ9NV58 838 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 TRIM49D1C9J1S8 452 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 AVILO75366 819 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 FARP2O94887 1054 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SPATA31D3P0C874 917 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SOX10P56693 466 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SBK1Q52WX2 424 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 DNAJC14Q6Y2X3 702 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SPATA31D4Q6ZUB0 917 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ADGRG2Q8IZP9 1017 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SMYD1Q8NB12 490 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 KLC4Q9NSK0 619 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 USP15Q9Y4E8 981 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ADCY6O43306 1168 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ATP13A4Q4VNC1 1196 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 MARC1Q5VT66 337 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF677Q86XU0 584 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 MCEMP1Q8IX19 187 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 IDI2Q9BXS1 227 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 MAT2BQ9NZL9 334 aa11.45□□□□□ -0.58
PRPF40A-202ENST00000410080 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.584e-7■■■■■ 86.2
PRPF40A-202ENST00000410080 TIMM44O43615 452 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 PIK3R1P27986 724 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 PFKPQ01813 784 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 OVGP1Q12889 678 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF248Q8NDW4 579 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF563Q8TA94 476 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 RAD54BQ9Y620 910 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SPAG6O75602 509 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SERPINH1P50454 418 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO42Q6P3S6 717 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 FAM9CQ8IZT9 166 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 SH2D3CQ8N5H7 860 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 EXOC2Q96KP1 924 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 FAM153AQ9UHL3 310 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 DRG1Q9Y295 367 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM120BA0PK00 339 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TAF4O00268 1085 aa11.44□□□□□ -0.58
PRPF40A-202ENST00000410080 TM9SF1O15321 606 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms