RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 GALNT2Q10471 571 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 IFRD2Q12894 506 aaPredicted RBP20.68■□□□□ 0.9
USP39-204ENST00000409766 COLGALT2Q8IYK4 626 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 HDAC11Q96DB2 347 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 VPS11Q9H270 941 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 UGT1A7Q9HAW7 530 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 UGT1A10Q9HAW8 530 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 UGT1A8Q9HAW9 530 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 SLC12A4Q9UP95 1085 aa20.68■□□□□ 0.9
USP39-204ENST00000409766 DHRS4L1P0CG22 281 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 GRIK1P39086 918 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 ETV4P43268 484 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 LGSNQ5TDP6 509 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 RNF34Q969K3 372 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 OSBPL2Q9H1P3 480 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 ABCC13Q9NSE7 274 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 ARHGEF38Q9NXL2 777 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 KLHL8Q9P2G9 620 aaPredicted RBP20.67■□□□□ 0.9
USP39-204ENST00000409766 TTC3P53804 2025 aa20.67■□□□□ 0.9
USP39-204ENST00000409766 OAZ2O95190 189 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 GSTA1P08263 222 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 ALADP13716 330 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 MX2P20592 715 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 SERPINB6P35237 376 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 GARSP41250 739 aaKnown RBP20.66■□□□□ 0.9
USP39-204ENST00000409766 CRADDP78560 199 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 CCDC63Q8NA47 563 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 URGCPQ8TCY9 931 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 APBB2Q92870 758 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 GORASP1Q9BQQ3 440 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 TBC1D13Q9NVG8 400 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 SHROOM3Q8TF72 1996 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 H0YHG0 523 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 IRAK2O43187 625 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 TRPA1O75762 1119 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 MGAT1P26572 445 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 CYP2C18P33260 490 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 PGFP49763 221 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 APLP1P51693 650 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 SESN2P58004 480 aaPredicted RBP20.66■□□□□ 0.9
USP39-204ENST00000409766 MGAT5Q09328 741 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 SLC39A12Q504Y0 691 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 RNF43Q68DV7 783 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 CASC4Q6P4E1 433 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 CCNJLQ8IV13 435 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 STARD7Q9NQZ5 370 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 PIH1D1Q9NWS0 290 aaKnown RBP20.66■□□□□ 0.9
USP39-204ENST00000409766 KLHL14Q9P2G3 628 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 NEU3Q9UQ49 428 aa20.66■□□□□ 0.9
USP39-204ENST00000409766 MTSS1O43312 755 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 RFPL1O75677 317 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 KRT38O76015 456 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 PACS2Q86VP3 889 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 DEPDC1BQ8WUY9 529 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 TTC17Q96AE7 1141 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 MTBPQ96DY7 904 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 RMDN2Q96LZ7 410 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 ZCWPW1Q9H0M4 648 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 KANSL3Q9P2N6 904 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 GGT7Q9UJ14 662 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 HMX2A2RU54 273 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 PGAM1P18669 254 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 OR1G1P47890 313 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 GALNTL6Q49A17 601 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 BTBD8Q5XKL5 378 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 CNPY4Q8N129 248 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 DPF3Q92784 378 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 NAT9Q9BTE0 207 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 SMOC2Q9H3U7 446 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 HAUS2Q9NVX0 235 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 DNAJB4Q9UDY4 337 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 MYO16Q9Y6X6 1858 aa20.65■□□□□ 0.9
USP39-204ENST00000409766 WDR91A4D1P6 747 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 ZBTB24O43167 697 aaPredicted RBP20.64■□□□□ 0.89
USP39-204ENST00000409766 UBOX5O94941 541 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 INHAP05111 366 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 CD68P34810 354 aaPredicted RBP20.64■□□□□ 0.89
USP39-204ENST00000409766 BRMS1LQ5PSV4 323 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 UNC5BQ8IZJ1 945 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 FITM2Q8N6M3 262 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 GBP7Q8N8V2 638 aaPredicted RBP20.64■□□□□ 0.89
USP39-204ENST00000409766 FAM111AQ96PZ2 611 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 HAPLN3Q96S86 360 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 RXFP1Q9HBX9 757 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 SYBUQ9NX95 663 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 TRHDEQ9UKU6 1024 aa20.64■□□□□ 0.89
USP39-204ENST00000409766 DNAJC8O75937 253 aaPredicted RBP20.63■□□□□ 0.89
USP39-204ENST00000409766 AP2A1O95782 977 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 CCNFP41002 786 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 SERPINB9P50453 376 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 ZBTB17Q13105 803 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 BMPR2Q13873 1038 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 TTC31Q49AM3 519 aaPredicted RBP20.63■□□□□ 0.89
USP39-204ENST00000409766 FAM133BQ5BKY9 247 aaKnown RBP20.63■□□□□ 0.89
USP39-204ENST00000409766 FBXW10Q5XX13 1052 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 CDHR3Q6ZTQ4 885 aa20.63■□□□□ 0.89
USP39-204ENST00000409766 OTOAQ7RTW8 1153 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms