RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PCDHA13Q9Y5I0 950 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
CHRNA1-205ENST00000409542 URB1O60287 2271 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 A0A1W2PQH9 124 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 MEI4A8MW99 385 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 GFRA2O00451 464 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 PDXKO00764 312 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 PHACTR2O75167 634 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 CILPO75339 1184 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 ERLIN1O75477 346 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 KLKB1P03952 638 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 C4BPAP04003 597 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 PLA2G4AP47712 749 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 GEN1Q17RS7 908 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 KNOP1Q1ED39 458 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 ASTE1Q2TB18 679 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 DBX2Q6ZNG2 339 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 TMPRSS7Q7RTY8 843 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 TRIM58Q8NG06 486 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 ZDHHC5Q9C0B5 715 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 PRDM16Q9HAZ2 1276 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 TM7SF3Q9NS93 570 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 KIAA1522Q9P206 1035 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 CLEC4EQ9ULY5 219 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 BTBD3Q9Y2F9 522 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 ATP8B3O60423 1300 aa13.27□□□□□ -0.29
CHRNA1-205ENST00000409542 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 NUMA1Q14980 2115 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 GOLGA8CPA6NN73 597 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 METTL12A8MUP2 240 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 SLC16A3O15427 465 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 DKK1O94907 266 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 SERPING1P05155 500 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 PLEKP08567 350 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ACO1P21399 889 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ADORA2BP29275 332 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ATP5C1P36542 298 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 TPMTP51580 245 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 NDST1P52848 882 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 COPAP53621 1224 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 DLG4P78352 724 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ADAM9Q13443 819 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 BIRC3Q13489 604 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ENPP2Q13822 863 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 HLA-BQ31612 363 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ZNF699Q32M78 642 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ZNF667Q5HYK9 610 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 CACUL1Q86Y37 369 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 TNIP3Q96KP6 325 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 DEF6Q9H4E7 631 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 THAP10Q9P2Z0 257 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 EIF2B4Q9UI10 523 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 UBE4BO95155 1302 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 ASXL3Q9C0F0 2248 aa13.26□□□□□ -0.29
CHRNA1-205ENST00000409542 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 FAM149AA5PLN7 773 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 BCAT2O15382 392 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 AKR1B10O60218 316 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 STC2O76061 302 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 RARGP13631 454 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 PRLRP16471 622 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 MATKP42679 507 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 MFAP3P55082 362 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 CYP4F3Q08477 520 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 NCOA4Q13772 614 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 NFIL3Q16649 462 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 LONRF2Q1L5Z9 754 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 FYB2Q5VWT5 728 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 WDR93Q6P2C0 686 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 CLEC20AQ6ZU45 233 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 CADM4Q8NFZ8 388 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 RHBDD1Q8TEB9 315 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 SORCS1Q8WY21 1168 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 GANQ9H2C0 597 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 FBXO44Q9H4M3 255 aa13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 METTL14Q9HCE5 456 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-205ENST00000409542 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms