RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 F5H5T6 163 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 L1CAMP32004 1257 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 ARL4AP40617 200 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 CETN2P41208 172 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 IFNAR2P48551 515 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 CDH6P55285 790 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 KRT81Q14533 505 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 PIK3R6Q5UE93 754 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 TRIM68Q6AZZ1 485 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 TXNRD3NBQ6F5E7 133 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 NYAP1Q6ZVC0 841 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 CHSY1Q86X52 802 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 FAM217AQ8IXS0 508 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 WBP2Q969T9 261 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 RBM41Q96IZ5 413 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 HPS4Q9NQG7 708 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 ANLNQ9NQW6 1124 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 GPATCH2LQ9NWQ4 482 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 DLGAP2Q9P1A6 1054 aa17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 RCOR3Q9P2K3 495 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 XPO7Q9UIA9 1087 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 PACSIN2Q9UNF0 486 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-208ENST00000409531 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 I6L893 689 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 ZRANB2O95218 330 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 KRT1P04264 644 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 TACR2P21452 398 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 AUHQ13825 339 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 FAM133BQ5BKY9 247 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 PPP6R3Q5H9R7 873 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 RABGAP1LQ5R372 815 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 RAP1GAP2Q684P5 730 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 BBS7Q8IWZ6 715 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 RCOR2Q8IZ40 523 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 DTWD2Q8NBA8 298 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 EXD1Q8NHP7 514 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 KRT35Q92764 455 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 CLDN23Q96B33 292 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 PRMT1Q99873 361 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 TLR10Q9BXR5 811 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 TMPRSS4Q9NRS4 437 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
TSPAN4-208ENST00000409531 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 LRRD1A4D1F6 860 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CTAGE9A4FU28 777 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ZNF487B1APH4 448 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 E9PAM4 449 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 H3BRJ5 948 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 DDX3YO15523 660 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CREB3O43889 395 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CYBBP04839 570 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ARSAP15289 507 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 KDELR1P24390 212 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CTHP32929 405 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 SOX9P48436 509 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 HCAR3P49019 387 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 PEX5P50542 639 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 COPS2P61201 443 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 AMPD2Q01433 879 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 SEMA3BQ13214 749 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 FZD5Q13467 585 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CA9Q16790 459 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ATP13A4Q4VNC1 1196 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 NADSYN1Q6IA69 706 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ADGRG2Q8IZP9 1017 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ZNF687Q8N1G0 1237 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 WDR24Q96S15 920 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ZNF670Q9BS34 389 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 CALN1Q9BXU9 219 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 RETREG1Q9H6L5 497 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 DONSONQ9NYP3 566 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 STIM2Q9P246 746 aa17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 PPARGC1AQ9UBK2 798 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-208ENST00000409531 ESPNB1AK53 854 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 EEF2KO00418 725 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 ENC1O14682 589 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 SRGAP2O75044 1071 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 LRIG2O94898 1065 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 NFATC1O95644 943 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 SLC6A4P31645 630 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 MAGEA9P43362 315 aa17.02■□□□□ 0.32
TSPAN4-208ENST00000409531 MARCKSL1P49006 195 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms