RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CASC4Q6P4E1 433 aa21.27■■□□□ 1
USP39-203ENST00000409470 LRRC8BQ6P9F7 803 aa21.27■■□□□ 1
USP39-203ENST00000409470 MON1AQ86VX9 555 aa21.27■■□□□ 1
USP39-203ENST00000409470 NPAS4Q8IUM7 802 aa21.27■■□□□ 1
USP39-203ENST00000409470 ATAD1Q8NBU5 361 aa21.27■■□□□ 1
USP39-203ENST00000409470 CCDC197Q8NCU1 140 aa21.27■■□□□ 1
USP39-203ENST00000409470 MZB1Q8WU39 189 aa21.27■■□□□ 1
USP39-203ENST00000409470 ELAC2Q9BQ52 826 aaKnown RBP21.27■■□□□ 1
USP39-203ENST00000409470 HCSTQ9UBK5 93 aa21.27■■□□□ 1
USP39-203ENST00000409470 MYO16Q9Y6X6 1858 aa21.27■□□□□ 0.99
USP39-203ENST00000409470 MTSS1O43312 755 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 PAGE1O75459 146 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 CPB1P15086 417 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 PRKCHP24723 683 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 MRPL58Q14197 206 aaKnown RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 SPARCL1Q14515 664 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 TCTN1Q2MV58 587 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SLC26A11Q86WA9 606 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 LRRC6Q86X45 466 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 GSDMBQ8TAX9 411 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 DENND1AQ8TEH3 1009 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 STAMBPL1Q96FJ0 436 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SCLYQ96I15 445 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 CELF6Q96J87 481 aaKnown RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 PLAC1Q9HBJ0 212 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SSU72Q9NP77 194 aaKnown RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 MARCH5Q9NX47 278 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 PCDHA11Q9Y5I1 949 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 TTC3P53804 2025 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 TBKBP1A7MCY6 615 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 TYROBPO43914 113 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 ASMTLO95671 621 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 MAGEA11P43364 429 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SESN2P58004 480 aaPredicted RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 FAAP100Q0VG06 881 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SF3A3Q12874 501 aaKnown RBP eCLIP21.26■□□□□ 0.99
USP39-203ENST00000409470 MTFR1Q15390 333 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 RNF187Q5TA31 235 aaPredicted RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 PIGWQ7Z7B1 504 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 SERPINB11Q96P15 392 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 TRIM56Q9BRZ2 755 aaKnown RBP21.26■□□□□ 0.99
USP39-203ENST00000409470 FGFR1OP2Q9NVK5 253 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 OSER1Q9NX31 292 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 VWA8A3KMH1 1905 aa21.26■□□□□ 0.99
USP39-203ENST00000409470 ATXN2Q99700 1313 aaKnown RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 GOLGA6L7A0A1B0GV03 622 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 SDR42E2A6NKP2 422 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 NT5C1B-RDH14C9J2C7 533 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 GOLGA8RI6L899 631 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 MOCS2O96007 188 aaPredicted RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 FGFR3P22607 806 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 ATN1P54259 1190 aaPredicted RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 PPP2R5DQ14738 602 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 SEPT7Q16181 437 aaKnown RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 FUT10Q6P4F1 479 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 C6orf89Q6UWU4 347 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 ARHGAP18Q8N392 663 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 TTC9BQ8N6N2 239 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 ANKS4BQ8N8V4 417 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 GPR152Q8TDT2 470 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 FCRL2Q96LA5 508 aaPredicted RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 KLF6Q99612 283 aaPredicted RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 MRPL9Q9BYD2 267 aaKnown RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 PAK6Q9NQU5 681 aaPredicted RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 PIH1D1Q9NWS0 290 aaKnown RBP21.25■□□□□ 0.99
USP39-203ENST00000409470 TET1Q8NFU7 2136 aa21.25■□□□□ 0.99
USP39-203ENST00000409470 WDR27A2RRH5 827 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 CXorf49A8MYA2 514 aaPredicted RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 C1QAP02745 245 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 CCL23P55773 120 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 CORO7P57737 925 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 COG7P83436 770 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 HHATQ5VTY9 493 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 OTUD6BQ8N6M0 293 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 ALKBH8Q96BT7 664 aaKnown RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 AGAP3Q96P47 875 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 GMIPQ9P107 970 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 ZBTB24O43167 697 aaPredicted RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 FAM155BO75949 473 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 ZWINTO95229 277 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 MGAT1P26572 445 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 PBX3P40426 434 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 USP46P62068 366 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 CRADDP78560 199 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 ELAVL2Q12926 359 aaKnown RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 ZKSCAN8Q15776 578 aaPredicted RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 TTC39BQ5VTQ0 682 aaPredicted RBP21.24■□□□□ 0.99
USP39-203ENST00000409470 TBC1D31Q96DN5 1066 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 RNF208Q9H0X6 261 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 HIPK3Q9H422 1215 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 CATSPERBQ9H7T0 1116 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 TRHDEQ9UKU6 1024 aa21.24■□□□□ 0.99
USP39-203ENST00000409470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.23■□□□□ 0.99
USP39-203ENST00000409470 MYO1CO00159 1063 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 DFFAO00273 331 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 SOAT2O75908 522 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 HTR7P34969 479 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 ZBTB17Q13105 803 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 SLC1A5Q15758 541 aa21.23■□□□□ 0.99
USP39-203ENST00000409470 LGSNQ5TDP6 509 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms