RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 SEMA4DQ92854 862 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CELF1Q92879 486 aaKnown RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HPS1Q92902 700 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KAT5Q92993 513 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZUFSPQ96AP4 578 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PBXIP1Q96AQ6 731 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NACC2Q96BF6 587 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMA16Q96EY4 203 aaKnown RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NRBF2Q96F24 287 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 VMP1Q96GC9 406 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF486Q96H40 463 aaPredicted RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TXNDC15Q96J42 360 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FEM1CQ96JP0 617 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MFSD14AQ96MC6 490 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FBXL18Q96ME1 805 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF512Q96ME7 567 aaPredicted RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LENG8Q96PV6 779 aaPredicted RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CDRT15Q96T59 188 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TCF12Q99081 682 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SORT1Q99523 831 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FAM118BQ9BPY3 351 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMEM121Q9BTD3 319 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C9orf16Q9BUW7 83 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SLC4A5Q9BY07 1137 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WDR11Q9BZH6 1224 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF518BQ9C0D4 1074 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HOXD1Q9GZZ0 328 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KLHL25Q9H0H3 589 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRPV6Q9H1D0 765 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF385DQ9H6B1 395 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ARMC7Q9H6L4 198 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF395Q9H8N7 513 aaPredicted RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SP140LQ9H930 580 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WDR41Q9HAD4 459 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SLC38A10Q9HBR0 1119 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 POPDC2Q9HBU9 364 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CPNE5Q9HCH3 593 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ANKHQ9HCJ1 492 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CYP26B1Q9NR63 512 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DUS2Q9NX74 493 aaKnown RBP3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GPRC5DQ9NZD1 345 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NPAP1Q9NZP6 1156 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PAK5Q9P286 719 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 COPG2Q9UBF2 871 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 VTI1BQ9UEU0 232 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SERPINB13Q9UIV8 391 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MID2Q9UJV3 735 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SARDHQ9UL12 918 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PSME2Q9UL46 239 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PCDHGC3Q9UN70 934 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CDC14AQ9UNH5 594 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CNTN6Q9UQ52 1028 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 USTQ9Y2C2 406 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ATP11BQ9Y2G3 1177 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZBTB1Q9Y2K1 713 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TCAF1Q9Y4C2 921 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 IRS2Q9Y4H2 1338 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DOCK5Q9H7D0 1870 aa3.16□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KAT6AQ92794 2004 aa3.15□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 IGLV3-22A0A075B6J6 115 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 C1orf232A0A0U1RR37 186 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 LOC100653049A0A140TA62 436 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 A0A1B0GTW7 788 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 LOC105371267A0A1B0GV96 52 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 TCRBV7S3A2A0A539 114 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 TCRBV5S1A1TA0A578 114 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 ARHGEF35A5YM69 484 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 SAC3D1A6NKF1 404 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 C3orf70A6NLC5 250 aaPredicted RBP3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 SFI1A8K8P3 1242 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 SYCE1LA8MT33 242 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 CXorf49A8MYA2 514 aaPredicted RBP3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 EVPLLA8MZ36 301 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 KPNA7A9QM74 516 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 C9IYK1 514 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L15C9J2P7 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L10C9JJH3 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L13C9JLJ4 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L11C9JVI0 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L18D6R9N7 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L22D6RA61 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L17D6RBQ6 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L19D6RCP7 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 USP17L20D6RJB6 530 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 FAM86B1E9PN63 330 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 PI4K2BG5E9Z4 385 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 H0YAE9 185 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 C6orf229H3BNL8 230 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 J3QRK9 145 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 APOC4-APOC2K7ER74 178 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 VWA5AO00534 786 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 NOP56O00567 594 aaKnown RBP3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 AIM2O14862 343 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 TRIM24O15164 1050 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 CLOCKO15516 846 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 MSI1O43347 362 aaKnown RBP3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 SCO2O43819 266 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 ZBTB14O43829 449 aa3.15□□□□□ -1.91
RNU6ATAC40P-201ENST00000408580 CST8O60676 142 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms