RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 TM4SF5O14894 197 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 OPHN1O60890 802 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 C7P10643 843 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CEACAM1P13688 526 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CYP11B1P15538 503 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ENGP17813 658 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CD70P32970 193 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CDH5P33151 784 aaPredicted RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 RDXP35241 583 aaKnown RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CLCN1P35523 988 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CSKP41240 450 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 MATKP42679 507 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 MAPK8P45983 427 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 COPAP53621 1224 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 RPS24P62847 133 aaKnown RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 IRX4P78413 519 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 PLEKHG6Q3KR16 790 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 HSP90AA4PQ58FG1 418 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 MIIPQ5JXC2 388 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 BRMS1LQ5PSV4 323 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 SYPL2Q5VXT5 272 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 RAP1GAP2Q684P5 730 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 TMEM215Q68D42 235 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 NADSYN1Q6IA69 706 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 IL27RAQ6UWB1 636 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 OLFML1Q6UWY5 402 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 TRIM72Q6ZMU5 477 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 FAM183BPQ6ZVS7 135 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 DSG4Q86SJ6 1040 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC47A2Q86VL8 602 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 DEFB106AQ8N104 65 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ADAM32Q8TC27 787 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 SORCS1Q8WY21 1168 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 P2RY11Q96G91 374 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 RPRD1AQ96P16 312 aaPredicted RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 SPAG5Q96R06 1193 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 GPR174Q9BXC1 333 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 STK33Q9BYT3 514 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 SGK2Q9HBY8 427 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ACP6Q9NPH0 428 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 CYTH4Q9UIA0 394 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ITIH6Q6UXX5 1313 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SYNJ2BP-COX16A0A087WUM0 186 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 EDDM13A0A1B0GTR0 161 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 TARSL2A2RTX5 802 aaKnown RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 UPK3BL1B0FP48 263 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 UPK3BL2E5RIL1 263 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 F8VZ95 297 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 ARHGAP33O14559 1287 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CLDN11O75508 207 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 KCNK5O95279 499 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CCDC172P0C7W6 258 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 DESP17661 470 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 ECT2LQ008S8 904 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 MYL5Q02045 173 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC14A1Q13336 389 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SYCP1Q15431 976 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 TEAD4Q15561 434 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PTPRNQ16849 979 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 HNRNPA1L2Q32P51 320 aaKnown RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 UAP1L1Q3KQV9 507 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PTPN20Q4JDL3 420 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PITRM1Q5JRX3 1037 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CCDC183Q5T5S1 534 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 FAM102AQ5T9C2 384 aaPredicted RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CDKAL1Q5VV42 579 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 LRRC31Q6UY01 552 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 ARCQ7LC44 396 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC41A1Q8IVJ1 513 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CCAR2Q8N163 923 aaKnown RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 FRMD1Q8N878 549 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 GANCQ8TET4 914 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 C18orf8Q96DM3 657 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PGAP3Q96FM1 320 aaPredicted RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CCDC114Q96M63 670 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 GTPBP2Q9BX10 602 aaKnown RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 CAPN10Q9HC96 672 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 PRSS16Q9NQE7 514 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 TMEM74BQ9NUR3 256 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 TAB2Q9NYJ8 693 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 COX16Q9P0S2 106 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC25A13Q9UJS0 675 aa9.38□□□□□ -0.91
SNORD88A-201ENST00000408314 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms