RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ATXN2Q99700 1313 aaKnown RBP25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 SDR42E2A6NKP2 422 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 MSI1O43347 362 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PAGE1O75459 146 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 FGFR3P22607 806 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PRKCHP24723 683 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 RPA3P35244 121 aaPredicted RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 GARSP41250 739 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 WDR4P57081 412 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 HTRA3P83110 453 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 COG7P83436 770 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 TCTN1Q2MV58 587 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PIGWQ7Z7B1 504 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 LRRC6Q86X45 466 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 GSDMBQ8TAX9 411 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 STAMBPL1Q96FJ0 436 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 TGS1Q96RS0 853 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 ELAC2Q9BQ52 826 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 TMEM51Q9NW97 253 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 NUDT5Q9UKK9 219 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 ANKRD65E5RJM6 399 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 TYROBPO43914 113 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 HTR7P34969 479 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 FAAP100Q0VG06 881 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PPP2R5DQ14738 602 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 C6orf89Q6UWU4 347 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 ATAD1Q8NBU5 361 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 STKLD1Q8NE28 680 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 ALKBH8Q96BT7 664 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 B3GALT6Q96L58 329 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 SERPINB11Q96P15 392 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 MRPL9Q9BYD2 267 aaKnown RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PLAC1Q9HBJ0 212 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 MARCH5Q9NX47 278 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 TRHDEQ9UKU6 1024 aa25.33■■□□□ 1.65
DNMT3A-206ENST00000406659 CEP350Q5VT06 3117 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 MYO18AQ92614 2054 aaKnown RBP25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 GOLGA6L7A0A1B0GV03 622 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 TBKBP1A7MCY6 615 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 ASMTLO95671 621 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 CPB1P15086 417 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 CORO7P57737 925 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 ELAVL2Q12926 359 aaKnown RBP25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 HHATQ5VTY9 493 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 NUGGCQ68CJ6 796 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 CASC4Q6P4E1 433 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 FUT10Q6P4F1 479 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 ANKS4BQ8N8V4 417 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 DEPDC1BQ8WUY9 529 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 MYO16Q9Y6X6 1858 aa25.32■■□□□ 1.64
DNMT3A-206ENST00000406659 ZWINTO95229 277 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 C1QAP02745 245 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 RNF187Q5TA31 235 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 TTC39BQ5VTQ0 682 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 OTUD6BQ8N6M0 293 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 TBC1D31Q96DN5 1066 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 SCLYQ96I15 445 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 CELF6Q96J87 481 aaKnown RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 FCRL2Q96LA5 508 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 TMEM175Q9BSA9 504 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 CATSPERBQ9H7T0 1116 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 FGFR1OP2Q9NVK5 253 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 OSER1Q9NX31 292 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 WDR27A2RRH5 827 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 H7C4K7 107 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 FGF10O15520 208 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 SESN2P58004 480 aaPredicted RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 MTFR1Q15390 333 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 SEPT7Q16181 437 aaKnown RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 LGSNQ5TDP6 509 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 ITPRIPL1Q6GPH6 555 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 YTHDF3Q7Z739 585 aaKnown RBP25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 VAT1Q99536 393 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 GMIPQ9P107 970 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 HCSTQ9UBK5 93 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 ZNF180Q9UJW8 692 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 VWA8A3KMH1 1905 aa25.31■■□□□ 1.64
DNMT3A-206ENST00000406659 CXorf49A8MYA2 514 aaPredicted RBP25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 MSANTD2Q6P1R3 559 aa25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 CCNJLQ8IV13 435 aa25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 TTC9BQ8N6N2 239 aa25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 HIPK3Q9H422 1215 aa25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 OGDHLQ9ULD0 1010 aa25.3■■□□□ 1.64
DNMT3A-206ENST00000406659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 NT5C1B-RDH14C9J2C7 533 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 GOLGA8RI6L899 631 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 ZBTB24O43167 697 aaPredicted RBP25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 KRT37O76014 449 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 MOCS2O96007 188 aaPredicted RBP25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 GALTP07902 379 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 MGAT1P26572 445 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 YWHAQP27348 245 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 FOXN2P32314 431 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 ATN1P54259 1190 aaPredicted RBP25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 CCL23P55773 120 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 USP46P62068 366 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 SLC1A5Q15758 541 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 TEX44Q53QW1 395 aa25.29■■□□□ 1.64
DNMT3A-206ENST00000406659 STEAP4Q687X5 459 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms