RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	ATP2A2	P16615	1042 aa	Known RBP	29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	DRD4	P21917	467 aa		29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	FDFT1	P37268	417 aa		29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ALDH7A1	P49419	539 aa	Known RBP	29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	OTOP2	Q7RTS6	562 aa		29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	DCAKD	Q8WVC6	231 aa		29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	TRABD	Q9H4I3	376 aa		29.8	■■■□□ 2.36
CSNK1E-205	ENST00000405675	MYO16	Q9Y6X6	1858 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675		A0A1W2PPM1	405 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	OR6C75	A6NL08	312 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	TRIM66	O15016	1216 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	KRT15	P19012	456 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	NR1H3	Q13133	447 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	RTP2	Q5QGT7	225 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ADGRD1	Q6QNK2	874 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PRPF39	Q86UA1	669 aa	Known RBP	29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ZNF689	Q96CS4	500 aa	Predicted RBP	29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	CHMP6	Q96FZ7	201 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	SIGLEC10	Q96LC7	697 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	TRIM56	Q9BRZ2	755 aa	Known RBP	29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	CCDC134	Q9H6E4	229 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ZC3H7B	Q9UGR2	993 aa	Known RBP	29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	TTLL3	Q9Y4R7	772 aa		29.79	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PAGE1	O75459	146 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	VNN2	O95498	520 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	SRGAP2B	P0DMP2	458 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PSMB4	P28070	264 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	MAGEA11	P43364	429 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ZNF135	P52742	658 aa	Predicted RBP	29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ARTN	Q5T4W7	220 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	CYTH2	Q99418	400 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	CRISPLD1	Q9H336	500 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	SLC27A5	Q9Y2P5	690 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	RAD54B	Q9Y620	910 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	SPAG7	O75391	227 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	C1QA	P02745	245 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PPID	Q08752	370 aa	Known RBP	29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	KBTBD12	Q3ZCT8	623 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	C16orf59	Q7L2K0	433 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PDCD7	Q8N8D1	485 aa	Known RBP	29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	IL23A	Q9NPF7	189 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	GMIP	Q9P107	970 aa		29.78	■■■□□ 2.36
CSNK1E-205	ENST00000405675	PTPN3	P26045	913 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	MSH2	P43246	934 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	GALNT2	Q10471	571 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	BRMS1L	Q5PSV4	323 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	EBAG9	O00559	213 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	RWDD4	Q6NW29	188 aa	Known RBP	29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	MON1A	Q86VX9	555 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	C4orf33	Q8N1A6	199 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	CELF6	Q96J87	481 aa	Known RBP	29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	ZMYND15	Q9H091	742 aa		29.77	■■■□□ 2.36
CSNK1E-205	ENST00000405675	TBC1D4	O60343	1298 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	CPB1	P15086	417 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	CCR1	P32246	355 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	ELAVL2	Q12926	359 aa	Known RBP	29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PARP6	Q2NL67	630 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MZB1	Q8WU39	189 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	HAPLN3	Q96S86	360 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	FERMT1	Q9BQL6	677 aa		29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	RC3H2	Q9HBD1	1191 aa	Known RBP	29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	XAB2	Q9HCS7	855 aa	Known RBP	29.76	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MTMR11	A4FU01	709 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	EFCAB14	O75071	495 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	SPAG6	O75602	509 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	CP	P00450	1065 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	SPOUT1	Q5T280	376 aa	Known RBP	29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	RNF19B	Q6ZMZ0	732 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	UNC5A	Q6ZN44	842 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	GDAP1	Q8TB36	358 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	GORASP1	Q9BQQ3	440 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	IL37	Q9NZH6	218 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MRPL42	Q9Y6G3	142 aa	Known RBP	29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	GARS	P41250	739 aa	Known RBP	29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PID1	Q7Z2X4	250 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	LRRC34	Q8IZ02	419 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	BAD	Q92934	168 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	LRRC39	Q96DD0	335 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	FBXO44	Q9H4M3	255 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PIH1D1	Q9NWS0	290 aa	Known RBP	29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	IGSF9	Q9P2J2	1179 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MAD1L1	Q9Y6D9	718 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PLXNA3	P51805	1871 aa		29.75	■■■□□ 2.35
CSNK1E-205	ENST00000405675	NCAM2	O15394	837 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PPP2R5D	Q14738	602 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PRSS55	Q6UWB4	352 aa	Predicted RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	DYDC1	Q8WWB3	177 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	HDAC11	Q96DB2	347 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	FCRL2	Q96LA5	508 aa	Predicted RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	EBNA1BP2	Q99848	306 aa	Known RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	TTPAL	Q9BTX7	342 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	EIF2B3	Q9NR50	452 aa	Known RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	KLHL8	Q9P2G9	620 aa	Predicted RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	PRKAG2	Q9UGJ0	569 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MYO18A	Q92614	2054 aa	Known RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	FAM47DP	A6NHR8	397 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	KCNU1	A8MYU2	1149 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	MOCS2	O96007	188 aa	Predicted RBP	29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	ZBTB17	Q13105	803 aa		29.74	■■■□□ 2.35
CSNK1E-205	ENST00000405675	GPR17	Q13304	367 aa		29.74	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms