RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 FBXO22Q8NEZ5 403 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 FBF1Q8TES7 1133 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 DPF3Q92784 378 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 TOP1MTQ969P6 601 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 FCRL2Q96LA5 508 aaPredicted RBP16.7■□□□□ 0.26
PARVB-203ENST00000404989 CEP295NLQ96MC4 621 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 CATSPERBQ9H7T0 1116 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 PLAC1Q9HBJ0 212 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 INTS9Q9NV88 658 aaKnown RBP16.7■□□□□ 0.26
PARVB-203ENST00000404989 BACE2Q9Y5Z0 518 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 CDY1Q9Y6F8 540 aa16.7■□□□□ 0.26
PARVB-203ENST00000404989 WDR27A2RRH5 827 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 GMNCA6NCL1 334 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 POC1B-GALNT4F8VUJ3 575 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 FGF10O15520 208 aaPredicted RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 CHN1P15882 459 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 PTPN3P26045 913 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 STX2P32856 288 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 GRIA1P42261 906 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 NRG1Q02297 640 aaPredicted RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 TAF10Q12962 218 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 EFTUD2Q15029 972 aaKnown RBP eCLIP16.69■□□□□ 0.26
PARVB-203ENST00000404989 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 ACBD5Q5T8D3 534 aaPredicted RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 C14orf80Q86SX3 495 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 LZTR1Q8N653 840 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 ANKLE1Q8NAG6 615 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 ZSCAN18Q8TBC5 510 aaPredicted RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 FBXO32Q969P5 355 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 HDAC11Q96DB2 347 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 SIGLEC10Q96LC7 697 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 XPO6Q96QU8 1125 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 CYTH2Q99418 400 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 VAT1Q99536 393 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 SEPT5Q99719 369 aaPredicted RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 DHRS4Q9BTZ2 278 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 CEP41Q9BYV8 373 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 RC3H2Q9HBD1 1191 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 OLA1Q9NTK5 396 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
PARVB-203ENST00000404989 CLIC5Q9NZA1 410 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 IGSF9Q9P2J2 1179 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 TBK1Q9UHD2 729 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 TLR6Q9Y2C9 796 aa16.69■□□□□ 0.26
PARVB-203ENST00000404989 MYO18AQ92614 2054 aaKnown RBP16.69■□□□□ 0.26
PARVB-203ENST00000404989 ABHD14A-ACY1A0A1B0GW23 586 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 NDUFAB1O14561 156 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 C1QAP02745 245 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 ZDHHC11BP0C7U3 371 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 SRGAP2BP0DMP2 458 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 RPL17P18621 184 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 ATF6P18850 670 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 MTA1Q13330 715 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TMED2Q15363 201 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TMCO2Q7Z6W1 182 aaPredicted RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 NLRP14Q86W24 1093 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 DEPDC1BQ8WUY9 529 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TRIM43Q96BQ3 446 aaPredicted RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 GORASP1Q9BQQ3 440 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 DONSONQ9NYP3 566 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 SEPT10Q9P0V9 454 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TRHDEQ9UKU6 1024 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 HS3ST4Q9Y661 456 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 SHROOM3Q8TF72 1996 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 SLC38A8A6NNN8 435 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 F5H423 210 aaPredicted RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 KCNK1O00180 336 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 TBX18O95935 607 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 FAM107AO95990 144 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 BRAFP15056 766 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 PSMB4P28070 264 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 MSH2P43246 934 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 MLLT6P55198 1093 aaPredicted RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 DEFB103AP81534 67 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 PSMD5Q16401 504 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 PIK3R6Q5UE93 754 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 CCNJLQ8IV13 435 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 ZNF683Q8IZ20 524 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 TBC1D31Q96DN5 1066 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 CELF6Q96J87 481 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 C1orf74Q96LT6 269 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 CCDC134Q9H6E4 229 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
PARVB-203ENST00000404989 NKIRAS1Q9NYS0 192 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 FNIP2Q9P278 1114 aa16.68■□□□□ 0.26
PARVB-203ENST00000404989 RASA4BC9J798 803 aa16.67■□□□□ 0.26
PARVB-203ENST00000404989 RASA4O43374 803 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms