RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NUMBP49757 651 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 TMEM198Q66K66 360 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 IL31Q6EBC2 164 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 RIOX2Q8IUF8 465 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 PNPLA1Q8N8W4 532 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 SMARCAD1Q9H4L7 1026 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 PRDM12Q9H4Q4 367 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 SNX15Q9NRS6 342 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 COPG2Q9UBF2 871 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 POMPQ9Y244 141 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 RGPD3A6NKT7 1758 aaPredicted RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 RGPD4Q7Z3J3 1758 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 LCTP09848 1927 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 CPA3P15088 417 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 ARSAP15289 507 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 AOC1P19801 751 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 ITGAXP20702 1163 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 ARL4AP40617 200 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 SULT1E1P49888 294 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 NUDT2P50583 147 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 RBBP5Q15291 538 aaKnown RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 PTAR1Q7Z6K3 402 aaPredicted RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 STRA8Q7Z7C7 330 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 DEFB106AQ8N104 65 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 GALNT15Q8N3T1 639 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 MCUQ8NE86 351 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 AFG1LQ8WV93 481 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 SNX10Q9Y5X0 201 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 STX16-NPEPL1H3BU86 382 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 HBP1O60381 514 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 GLRA3O75311 464 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 SERPINE1P05121 402 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 SERPINB9P50453 376 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 RAB27AP51159 221 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ABCE1P61221 599 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 MSLNQ13421 630 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 KCTD2Q14681 263 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 CERCAMQ5T4B2 595 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 PAOXQ6QHF9 649 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 SNX31Q8N9S9 440 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 NMD3Q96D46 503 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 SPATA13Q96N96 652 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 LENG8Q96PV6 779 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 CLIC5Q9NZA1 410 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 KLHL8Q9P2G9 620 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 CCDC160A6NGH7 325 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 BIRC5O15392 142 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 SPATA31D3P0C874 917 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 MCF2P10911 925 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 DESP17661 470 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 GRIA2P42262 883 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ROR2Q01974 943 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ADIGQ0VDE8 80 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 MED21Q13503 144 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 GK3PQ14409 553 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ZNF460Q14592 562 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 CNPY1Q3B7I2 92 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 KYAT3Q6YP21 454 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 SPATA31D4Q6ZUB0 917 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ZNF567Q8N184 647 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.28□□□□□ -0.443e-8■■■□□ 14.9
RBM39-206ENST00000403542 QKIQ96PU8 341 aaKnown RBP eCLIP12.28□□□□□ -0.446e-25■■■□□ 16.5
RBM39-206ENST00000403542 CAMKK2Q96RR4 588 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ASB7Q9H672 318 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 NUP205Q92621 2012 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 FAM72CH0Y354 149 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 TK2O00142 265 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 MDM4O15151 490 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 PHGDHO43175 533 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 TSPAN1O60635 241 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 MPSTP25325 297 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 RXRBP28702 533 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ATICP31939 592 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 MRPS22P82650 360 aaKnown RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 IFRD2Q12894 506 aaPredicted RBP12.28□□□□□ -0.44
RBM39-206ENST00000403542 SEMA5AQ13591 1074 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 DPYSL2Q16555 572 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 FAM72AQ5TYM5 149 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 FAM72DQ6L9T8 149 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 ARCQ7LC44 396 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 PLPPR4Q7Z2D5 763 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 TMEM110Q86TL2 294 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 FAM72BQ86X60 149 aa12.28□□□□□ -0.44
RBM39-206ENST00000403542 LRRC39Q96DD0 335 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms