RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TTC31Q49AM3 519 aaPredicted RBP12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PIK3R6Q5UE93 754 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 NADSYN1Q6IA69 706 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 MMAAQ8IVH4 418 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 AHI1Q8N157 1196 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SLC25A45Q8N413 288 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FAM181AQ8N9Y4 354 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 OR2T34Q8NGX1 318 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GANCQ8TET4 914 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TTC17Q96AE7 1141 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TMA16Q96EY4 203 aaKnown RBP12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CUEDC2Q9H467 287 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ADAMTS1Q9UHI8 967 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CLCA2Q9UQC9 943 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CA5BQ9Y2D0 317 aa12.38□□□□□ -0.43
SPTLC1P3-201ENST00000403408 USP9YO00507 2555 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 YJEFN3A6XGL0 299 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 E7ENQ6 273 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ARHGAP6O43182 974 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TBL1XO60907 577 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SDC3O75056 442 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 MT-CO3P00414 261 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 MPOP05164 745 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CDK4P11802 303 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ACP1P24666 158 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 DRD3P35462 400 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ACTN2P35609 894 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CSKP41240 450 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GCLMP48507 274 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CCR5P51681 352 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TKTL1P51854 596 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ADPRHP54922 357 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 HNRNPA1L2Q32P51 320 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TAF1BQ53T94 588 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ADGRF1Q5T601 910 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 GOLGA1Q92805 767 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 TATDN2Q93075 761 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SERAC1Q96JX3 654 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PRICKLE1Q96MT3 831 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 UBXN6Q9BZV1 441 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 NIF3L1Q9GZT8 377 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 UCKL1Q9NWZ5 548 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SUN2Q9UH99 717 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SLCO3A1Q9UIG8 710 aa12.37□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LY6G6EA0A0G2JKS1 128 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 B8ZZF3 427 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SPTLC2O15270 562 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LATO43561 262 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ZBED1O96006 694 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 IGLV3-27P01718 113 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 NR3C1P04150 777 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 VAV1P15498 845 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 POLR2EP19388 210 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 SLC8A1P32418 973 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 AFMP43652 599 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 NUMBP49757 651 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ILKQ13418 452 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 E2F5Q15329 346 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ARHGAP17Q68EM7 881 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 WBP1Q96G27 269 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 HEXIM2Q96MH2 286 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 LGMNQ99538 433 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ERVMER34-1Q9H9K5 563 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 U3KQA8 63 aa12.36□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 IKBKBO14920 756 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 CASC3O15234 703 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ATP5BP06576 529 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 PSMD8P48556 350 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 RPS24P62847 133 aaKnown RBP12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 AMPD3Q01432 767 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 RHDQ02161 417 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 STK38Q15208 465 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 BSPRYQ5W0U4 402 aa12.35□□□□□ -0.43
SPTLC1P3-201ENST00000403408 STK40Q8N2I9 435 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms