RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 IRX4P78413 519 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 GBE1Q04446 702 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 SLC10A2Q12908 348 aaPredicted RBP20.37■□□□□ 0.85
CCDC47-202ENST00000403162 NAB1Q13506 487 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 PCLAFQ15004 111 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 DPYSL2Q16555 572 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 GOLGA7BQ2TAP0 167 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 PPP6R3Q5H9R7 873 aaPredicted RBP20.37■□□□□ 0.85
CCDC47-202ENST00000403162 C16orf46Q6P387 395 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 OR6Y1Q8NGX8 325 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 ATP2A3Q93084 1043 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 DDX50Q9BQ39 737 aaKnown RBP20.37■□□□□ 0.85
CCDC47-202ENST00000403162 VCX3BQ9H321 246 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 PRMT7Q9NVM4 692 aaPredicted RBP20.37■□□□□ 0.85
CCDC47-202ENST00000403162 ERAP1Q9NZ08 941 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 DCDC2Q9UHG0 476 aa20.37■□□□□ 0.85
CCDC47-202ENST00000403162 ARHGAP42A6NI28 874 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 ZCCHC18P0CG32 403 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 PIM1P11309 404 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-202ENST00000403162 GRK2P25098 689 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 SLC26A2P50443 739 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 XIAPP98170 497 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 PDE1CQ14123 709 aaPredicted RBP20.36■□□□□ 0.85
CCDC47-202ENST00000403162 PKDCCQ504Y2 493 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 ACTRT2Q8TDY3 377 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 SLC4A5Q9BY07 1137 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 IFT122Q9HBG6 1241 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 Q9Y3F1 56 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 TPP1O14773 563 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 CDK7P50613 346 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 FAM187BQ17R55 369 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 PMF1Q6P1K2 205 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 KCNT2Q6UVM3 1135 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 PACS1Q6VY07 963 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 MAVSQ7Z434 540 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 TMEM110Q86TL2 294 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 SHKBP1Q8TBC3 707 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 TRAPPC12Q8WVT3 735 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 CDKL2Q92772 493 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 XPNPEP3Q9NQH7 507 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 GTF2IRD1Q9UHL9 959 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 TBC1D30Q9Y2I9 924 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 CEP350Q5VT06 3117 aa20.36■□□□□ 0.85
CCDC47-202ENST00000403162 WDR27A2RRH5 827 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 A6NJR5 290 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 SEPT4O43236 478 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
CCDC47-202ENST00000403162 SETSIPP0DME0 302 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 HOXD8P13378 290 aaPredicted RBP20.35■□□□□ 0.85
CCDC47-202ENST00000403162 CCND3P30281 292 aaPredicted RBP20.35■□□□□ 0.85
CCDC47-202ENST00000403162 IDH3AP50213 366 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 PRMT2P55345 433 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 TMEM132DQ14C87 1099 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 INSCQ1MX18 579 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 EFCAB12Q6NXP0 572 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 CCDC33Q8N5R6 958 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 PXYLP1Q8TE99 480 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 PPP4R1Q8TF05 950 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 SORT1Q99523 831 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 C16orf70Q9BSU1 422 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 EBF3Q9H4W6 596 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 HESX1Q9UBX0 185 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 RNASEH1O60930 286 aaKnown RBP20.35■□□□□ 0.85
CCDC47-202ENST00000403162 KCNA4P22459 653 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 FDFT1P37268 417 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 CPT1AP50416 773 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 CLCN3P51790 818 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 CCNIQ14094 377 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 SLC10A6Q3KNW5 377 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 RALGPS1Q5JS13 557 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 HEATR6Q6AI08 1181 aaKnown RBP20.35■□□□□ 0.85
CCDC47-202ENST00000403162 RASSF3Q86WH2 238 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 UNC5BQ8IZJ1 945 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 POU5F2Q8N7G0 328 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 PYDC1Q8WXC3 89 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 NCSTNQ92542 709 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 RNPEPQ9H4A4 650 aa20.35■□□□□ 0.85
CCDC47-202ENST00000403162 PROCP04070 461 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PRKCGP05129 697 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PTPN9P43378 593 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 RBP5P82980 135 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 BEX3Q00994 111 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 ASPHQ12797 758 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 RNF111Q6ZNA4 994 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 DENND5BQ6ZUT9 1274 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 CMTM5Q96DZ9 223 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 CDH22Q9UJ99 828 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 TRIP11Q15643 1979 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 H3BRB1 525 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 ZNF195O14628 629 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PAPSS1O43252 624 aaPredicted RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 HARS2P49590 506 aaKnown RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 KYAT1Q16773 422 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 PPP1R26Q5T8A7 1209 aaPredicted RBP20.34■□□□□ 0.85
CCDC47-202ENST00000403162 LRRC8BQ6P9F7 803 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 TTC30AQ86WT1 665 aa20.34■□□□□ 0.85
CCDC47-202ENST00000403162 ZDHHC17Q8IUH5 632 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms