RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PSMD11O00231 422 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 TRIM38O00635 465 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 PRMT3O60678 531 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 CACNB3P54284 484 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 BST2Q10589 180 aaKnown RBP8.55□□□□□ -1.04
CHD8-201ENST00000399982 KBTBD7Q8WVZ9 684 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 SGF29Q96ES7 293 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 C17orf75Q9HAS0 396 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
CHD8-201ENST00000399982 A2ML1A8K2U0 1454 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ATP10BO94823 1461 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MGRN1O60291 552 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CCNKO75909 580 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RB1P06400 928 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CYP2D6P10635 497 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CASP12Q6UXS9 341 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 VCPIP1Q96JH7 1222 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 EPB41L4BQ9H329 900 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 METTL21EPA6NDL7 271 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 LOC110117498-PIK3R3F6TDL0 507 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CYP2C9P11712 490 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 MAGEA2P43356 314 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 FXR2P51116 673 aaKnown RBP eCLIP8.54□□□□□ -1.047e-7■■■■■ 30.4
CHD8-201ENST00000399982 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 C1orf189Q5VU69 101 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ACAD10Q6JQN1 1059 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MRNIPQ6NTE8 343 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 PIK3R3Q92569 461 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MIEF1Q9NQG6 463 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 PRKAG3Q9UGI9 489 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ZNF112Q9UJU3 913 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MAGEC1O60732 1142 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 PSIP1O75475 530 aaKnown RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 SERPINA6P08185 405 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RARBP10826 455 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MSR1P21757 451 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 DRD4P21917 467 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 PTGER2P43116 358 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MYBPC1Q00872 1141 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 UBE2SQ16763 222 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 SWI5Q1ZZU3 235 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 GRTP1Q5TC63 336 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 BRINP3Q76B58 766 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RP9Q8TA86 221 aaKnown RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 ZNF512Q96ME7 567 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 SHCBP1LQ9BZQ2 653 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CRLS1Q9UJA2 301 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD8-201ENST00000399982 ZNF804BA4D1E1 1349 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 FGFR1P11362 822 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TFE3P19532 575 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 CES1P23141 567 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 GYG1P46976 350 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ANKFN1Q8N957 763 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 KIAA1257Q9ULG3 409 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 HPSEQ9Y251 543 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 SNAP23O00161 211 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CRABP2P29373 138 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CAPGP40121 348 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ARL10Q8N8L6 244 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 GPRASP2Q96D09 838 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 FAM118BQ9BPY3 351 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 C1QTNF1Q9BXJ1 281 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TNKS2Q9H2K2 1166 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CLIC5Q9NZA1 410 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 XPR1Q9UBH6 696 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RPH3AQ9Y2J0 694 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 FAM92AA1XBS5 289 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 STX16-NPEPL1H3BU86 382 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 STX16O14662 325 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 BPNT1O95861 308 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 FAM92BQ6ZTR7 304 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TMEM179Q6ZVK1 233 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 UTS2BQ765I0 119 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 GALNTL5Q7Z4T8 443 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 RACGAP1Q9H0H5 632 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 GNPTGQ9UJJ9 305 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 DYRK1BQ9Y463 629 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CLDN25C9JDP6 229 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 SLC1A6P48664 564 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 CCNHP51946 323 aaPredicted RBP8.54□□□□□ -1.04
CHD8-201ENST00000399982 AIFM3Q96NN9 605 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 TCF12Q99081 682 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 ACOT9Q9Y305 439 aa8.54□□□□□ -1.04
CHD8-201ENST00000399982 KIAA0556O60303 1618 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms