RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CLUHO75153 1309 aa15.58■□□□□ 0.08
COL25A1-201ENST00000399126 CHD9Q3L8U1 2897 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 KCNK1O00180 336 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 ALOX15BO15296 676 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 TIMP1P01033 207 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 HAPLN1P10915 354 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 SSTR1P30872 391 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 GPX6P59796 221 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 WDR5P61964 334 aaKnown RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 RWDD4Q6NW29 188 aaKnown RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 BEND5Q7L4P6 421 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 OTOP2Q7RTS6 562 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 RNF168Q8IYW5 571 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 AUTS2Q8WXX7 1259 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 FBXO32Q969P5 355 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 TLCD1Q96CP7 247 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 RC3H2Q9HBD1 1191 aaKnown RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 MAGED2Q9UNF1 606 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 PDE4DIPQ5VU43 2346 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 BPTFQ12830 3046 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 YWHAQP27348 245 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 GRIA1P42261 906 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 GUCY1A3Q02108 690 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 EFEMP1Q12805 493 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 PRKD1Q15139 912 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 RBBP5Q15291 538 aaKnown RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 USP41Q3LFD5 358 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 AGBL2Q5U5Z8 902 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 SPPL2BQ8TCT7 592 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 ZNF689Q96CS4 500 aaPredicted RBP15.57■□□□□ 0.08
COL25A1-201ENST00000399126 EPAS1Q99814 870 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 FOXP3Q9BZS1 431 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 FBXO44Q9H4M3 255 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 VPS37BQ9H9H4 285 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 TBK1Q9UHD2 729 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 CHMP2BQ9UQN3 213 aa15.57■□□□□ 0.08
COL25A1-201ENST00000399126 H7C4K7 107 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 RNF103O00237 685 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 RGS16O15492 202 aaPredicted RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 GCATO75600 419 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 CCNHP51946 323 aaPredicted RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 ARL4CP56559 192 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 KDM7AQ6ZMT4 941 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 MIB1Q86YT6 1006 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 CYP4X1Q8N118 509 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 FBXO36Q8NEA4 188 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 FCRL2Q96LA5 508 aaPredicted RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 SERPINB12Q96P63 405 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 CLSTN3Q9BQT9 956 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 TMEM109Q9BVC6 243 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 RABEP2Q9H5N1 569 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 NDFIP2Q9NV92 336 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 IL37Q9NZH6 218 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 MTRRQ9UBK8 725 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 RAG1P15918 1043 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 CCR1P32246 355 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 WASHC5Q12768 1159 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 EFTUD2Q15029 972 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 ANKRD20A2Q5SQ80 823 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 ANKRD20A1Q5TYW2 823 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 ANKRD20A3Q5VUR7 823 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 KIAA1841Q6NSI8 718 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 C14orf80Q86SX3 495 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 THOC1Q96FV9 657 aaKnown RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 PGM2Q96G03 612 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 TRIM56Q9BRZ2 755 aaKnown RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 TRIM62Q9BVG3 475 aa15.56■□□□□ 0.08
COL25A1-201ENST00000399126 RSPH9Q9H1X1 276 aaPredicted RBP15.56■□□□□ 0.08
COL25A1-201ENST00000399126 FAM92AA1XBS5 289 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 C5orf60A6NFR6 353 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 SEC24AO95486 1093 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 CREB1P16220 341 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 GCAP28676 217 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 BTG3Q14201 252 aaPredicted RBP15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PDCD2Q16342 344 aaPredicted RBP15.55■□□□□ 0.08
COL25A1-201ENST00000399126 SLC8B1Q6J4K2 584 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PIH1D1Q9NWS0 290 aaKnown RBP15.55■□□□□ 0.08
COL25A1-201ENST00000399126 KIAA1671Q9BY89 1806 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 MYO7AQ13402 2215 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 ABHD14A-ACY1A0A1B0GW23 586 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 E7ESA3 106 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 CHADO15335 359 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 HMBSP08397 361 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 DNAJB2P25686 324 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 HCAR3P49019 387 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 IFT88Q13099 833 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PDK1Q15118 436 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PIK3R6Q5UE93 754 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 ARHGAP36Q6ZRI8 547 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 ARHGEF18Q6ZSZ5 1173 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 ZNF534Q76KX8 674 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 CAND1Q86VP6 1230 aaKnown RBP15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PDIK1LQ8N165 341 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 ANKLE1Q8NAG6 615 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 MDM1Q8TC05 714 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 PYROXD1Q8WU10 500 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 KLC2Q9H0B6 622 aa15.55■□□□□ 0.08
COL25A1-201ENST00000399126 HS3ST4Q9Y661 456 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms