RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 KIAA1522Q9P206 1035 aaPredicted RBP11.54□□□□□ -0.56
SRMP1-201ENST00000398959 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 SCML1Q9UN30 329 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 TLR6Q9Y2C9 796 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 SNX11Q9Y5W9 270 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 SLCO1B1Q9Y6L6 691 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 SHROOM3Q8TF72 1996 aa11.54□□□□□ -0.56
SRMP1-201ENST00000398959 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 FAM47DPA6NHR8 397 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CAPN9O14815 690 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 SART1O43290 800 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 SIN3BO75182 1162 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 MOCS3O95396 460 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 C7P10643 843 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 KRT5P13647 590 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CD27P26842 260 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CSKP41240 450 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 RPS24P62847 133 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 NUCB2P80303 420 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 GCNT1Q02742 428 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 NNTQ13423 1086 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 LAYNQ6UX15 382 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CCNI2Q6ZMN8 369 aaPredicted RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 USP30Q70CQ3 517 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CFAP52Q8N1V2 620 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 LMO3Q8TAP4 145 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 BAHD1Q8TBE0 780 aaPredicted RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 ADAM32Q8TC27 787 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 NELFBQ8WX92 580 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 IGSF8Q969P0 613 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 TTC17Q96AE7 1141 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 TRIM62Q9BVG3 475 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CCDC86Q9H6F5 360 aaKnown RBP11.53□□□□□ -0.56
SRMP1-201ENST00000398959 FBXL12Q9NXK8 326 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CTNND2Q9UQB3 1225 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 NAALADL1Q9UQQ1 740 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 ACACAQ13085 2346 aa11.53□□□□□ -0.56
SRMP1-201ENST00000398959 CACNA1GO43497 2377 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 TAF4O00268 1085 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 KCNK3O14649 394 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 MID1O15344 667 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 MED7O43513 233 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 LUC7L3O95232 432 aaKnown RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 APOEP02649 317 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 FYNP06241 537 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 SRPRAP08240 638 aaKnown RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 ACADSBP45954 432 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 CCT8P50990 548 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 C21orf59P57076 290 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 BECN1Q14457 450 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 MS4A13Q5J8X5 152 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 PITRM1Q5JRX3 1037 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 RNF219Q5W0B1 726 aaPredicted RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 KIAA0895LQ68EN5 471 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 LRSAM1Q6UWE0 723 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 DBX2Q6ZNG2 339 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 MMS22LQ6ZRQ5 1243 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 LGI2Q8N0V4 545 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 MYO19Q96H55 970 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 LMLNQ96KR4 655 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 OMDQ99983 421 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 ACE2Q9BYF1 805 aaPredicted RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 INTS6Q9UL03 887 aaKnown RBP11.52□□□□□ -0.57
SRMP1-201ENST00000398959 ERVW-1Q9UQF0 538 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 BTBD3Q9Y2F9 522 aa11.52□□□□□ -0.57
SRMP1-201ENST00000398959 ZFYVE26Q68DK2 2539 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 A0A1W2PP55 124 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 TARSL2A2RTX5 802 aaKnown RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 LRRC72A6NJI9 287 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 TTC34A8MYJ7 566 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 H0Y8X5 98 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 RNASEH2AO75792 299 aaKnown RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 LETM1O95202 739 aaPredicted RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 GNA14O95837 355 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 CAPNS1P04632 268 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 IGHV4-34P06331 123 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 CTSKP43235 329 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 GRK6P43250 576 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 GPD2P43304 727 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 STX17P56962 302 aa11.51□□□□□ -0.57
SRMP1-201ENST00000398959 RACK1P63244 317 aaKnown RBP11.51□□□□□ -0.57
SRMP1-201ENST00000398959 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms