RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BTG3Q14201 252 aaPredicted RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 RRM2BQ7LG56 351 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CLEC4FQ8N1N0 589 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 LPCAT1Q8NF37 534 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CEP70Q8NHQ1 597 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 NMRK2Q9NPI5 230 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ANKRD6Q9Y2G4 727 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 XPO1O14980 1071 aaKnown RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 CHKAP35790 457 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 PALB2Q86YC2 1186 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 LZICQ8WZA0 190 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 NAF1Q96HR8 494 aaKnown RBP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 ACSS3Q9H6R3 686 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 SEPT3Q9UH03 358 aa14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
PCDHGA11-201ENST00000398587 SOWAHBA6NEL2 793 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 STK25O00506 426 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ALOX15BO15296 676 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 MMP3P08254 477 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 CACHD1Q5VU97 1274 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 TMPRSS6Q8IU80 811 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 TAGAPQ8N103 731 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 GALNT4Q8N4A0 578 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ECSITQ9BQ95 431 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 SMPD4Q9NXE4 827 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 COQ4Q9Y3A0 265 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 GLTPD2A6NH11 291 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 BTBD19C9JJ37 291 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 CILPO75339 1184 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 SPIRE1Q08AE8 756 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 KRT72Q14CN4 511 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 C9orf57Q5W0N0 161 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ANKS3Q6ZW76 656 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 AMIGO3Q86WK7 504 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM9CQ8IZT9 166 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 TNIP2Q8NFZ5 429 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 DUSP16Q9BY84 665 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM32AQ9Y421 112 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 DUOX1Q9NRD9 1551 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ATP5BP06576 529 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ERCC2P18074 760 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 MMP13P45452 471 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF284Q2VY69 593 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 LRRC49Q8IUZ0 686 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 CPXM1Q96SM3 734 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 VTI1BQ9UEU0 232 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NCF1BA6NI72 391 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NCF1CA8MVU1 366 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 C5orf58C9J3I9 102 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 SNX3O60493 162 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 SERPIND1P05546 499 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NCF1P14598 390 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 PPP3CCP48454 512 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 HIST2H2ACQ16777 129 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 TRMT5Q32P41 509 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NOL9Q5SY16 702 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 HIST2H2AA3Q6FI13 130 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NEPROQ6NW34 567 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 MON1BQ7L1V2 547 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 OR52K1Q8NGK4 314 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 DACT3Q96B18 629 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 CNDP1Q96KN2 507 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 POLR1EQ9GZS1 481 aaKnown RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ERVK-5Q9HDB9 667 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 RGS18Q9NS28 235 aa14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 UXTQ9UBK9 157 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 UBA2Q9UBT2 640 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA11-201ENST00000398587 ONECUT3O60422 494 aaPredicted RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 DAB1O75553 588 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 TRIM16O95361 564 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 TFE3P19532 575 aaPredicted RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 SPDYE7PQ495Y7 208 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 STRADAQ7RTN6 431 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 DAW1Q8N136 415 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 C1orf127Q8N9H9 656 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 ZNF555Q8NEP9 628 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 OXNAD1Q96HP4 312 aaPredicted RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 MRPL45Q9BRJ2 306 aaKnown RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 C17orf80Q9BSJ5 609 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 FAM124BQ9H5Z6 455 aaPredicted RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 CHCHD3Q9NX63 227 aaKnown RBP14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 TAS2R13Q9NYV9 303 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 COG5Q9UP83 839 aa14.52□□□□□ -0.08
PCDHGA11-201ENST00000398587 SMIM28A0A1B0GU29 152 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 SEC24DO94855 1032 aaPredicted RBP14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 FKBP9O95302 570 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 RAG1P15918 1043 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 GOT1P17174 413 aa14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 RPA3P35244 121 aaPredicted RBP14.52□□□□□ -0.09
PCDHGA11-201ENST00000398587 XRCC4Q13426 336 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms