RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 F5H5T6 163 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 F9P00740 461 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 NDUFV2P19404 249 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 BCKDHBP21953 392 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 PRKCIP41743 596 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 IRAK1P51617 712 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 AUHQ13825 339 aaKnown RBP17.26■□□□□ 0.35
APTR-201ENST00000398043 USP39Q53GS9 565 aaKnown RBP17.26■□□□□ 0.35
APTR-201ENST00000398043 RAB6CQ53S08 254 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 MBLAC2Q68D91 279 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 SDE2Q6IQ49 451 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 C14orf80Q86SX3 495 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 EMC1Q8N766 993 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 FRMD1Q8N878 549 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 LOXL4Q96JB6 756 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 CIPCQ9C0C6 399 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 TKTL2Q9H0I9 626 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 RAB6CQ9H0N0 254 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 WDCPQ9H6R7 721 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 TMPRSS4Q9NRS4 437 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 ADAM22Q9P0K1 906 aa17.26■□□□□ 0.35
APTR-201ENST00000398043 MBD1Q9UIS9 605 aaPredicted RBP17.26■□□□□ 0.35
APTR-201ENST00000398043 GJB6O95452 261 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 DLDP09622 509 aaKnown RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 NSFP46459 744 aaKnown RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 UBASH3AP57075 661 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 TPM4P67936 248 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 DEUP1Q05D60 604 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 E2F5Q15329 346 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CCDC14Q49A88 953 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 PMS2CLQ68D20 193 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 ACAD10Q6JQN1 1059 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CXorf57Q6NSI4 855 aaKnown RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 PHLDB2Q86SQ0 1253 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 C3orf20Q8ND61 904 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CYB5D2Q8WUJ1 264 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 RLN3Q8WXF3 142 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CENPIQ92674 756 aaPredicted RBP17.25■□□□□ 0.35
APTR-201ENST00000398043 RNF34Q969K3 372 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 MRGPRX1Q96LB2 322 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 TAS2R14Q9NYV8 317 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 GMEB2Q9UKD1 530 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 LAMA1P25391 3075 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 CACNA1EQ15878 2313 aa17.25■□□□□ 0.35
APTR-201ENST00000398043 ADAMTS9Q9P2N4 1935 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 A0A1B0GVM2 712 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 A0A1W2PQJ5 194 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 TYW5A2RUC4 315 aaKnown RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 TCAF2A6NFQ2 919 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 LRP3O75074 770 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 EPN2O95208 641 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 CALB1P05937 261 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 GGCXP38435 758 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 PTPN9P43378 593 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 PLK1P53350 603 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 COPAP53621 1224 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 CAMK2GQ13555 558 aaPredicted RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 CDH18Q13634 790 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 PITRM1Q5JRX3 1037 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 PPP1R15BQ5SWA1 713 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 SH3PXD2AQ5TCZ1 1133 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 TTC39BQ5VTQ0 682 aaPredicted RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 ZNF571Q7Z3V5 609 aaPredicted RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 MCOLN2Q8IZK6 566 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 APCDD1Q8J025 514 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 OR52K2Q8NGK3 314 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 RXFP2Q8WXD0 754 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 ERLEC1Q96DZ1 483 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 ALG14Q96F25 216 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 MRGPRX3Q96LB0 322 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 C1orf74Q96LT6 269 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 MKRN2Q9H000 416 aaKnown RBP17.24■□□□□ 0.35
APTR-201ENST00000398043 SLC6A17Q9H1V8 727 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 HAUS4Q9H6D7 363 aa17.24■□□□□ 0.35
APTR-201ENST00000398043 BCCIPQ9P287 314 aaKnown RBP eCLIP17.24■□□□□ 0.35
APTR-201ENST00000398043 IGLV3-10A0A075B6K4 115 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 SIGLEC16A6NMB1 481 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 DRGXA6NNA5 263 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 GOLGA6L19H0YKK7 550 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 POLR2EP19388 210 aaKnown RBP17.23■□□□□ 0.35
APTR-201ENST00000398043 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
APTR-201ENST00000398043 CSKP41240 450 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 SPEM2Q0P670 501 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 ASIC2Q16515 512 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 C15orf59Q2T9L4 293 aaPredicted RBP17.23■□□□□ 0.35
APTR-201ENST00000398043 PLEKHG6Q3KR16 790 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 RABGAP1LQ5R372 815 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 PLA2G2CQ5R387 149 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 SFMBT2Q5VUG0 894 aa17.23■□□□□ 0.35
APTR-201ENST00000398043 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms