RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TP53INP2Q8IXH6 220 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TTC13Q8NBP0 860 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 USP13Q92995 863 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 LRRC19Q9H756 370 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 LSM7Q9UK45 103 aaKnown RBP21.84■■□□□ 1.09
CPNE1-204ENST00000397443 NUP205Q92621 2012 aa21.84■■□□□ 1.09
CPNE1-204ENST00000397443 TTI1O43156 1089 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 CNTN5O94779 1100 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 EIF3EP60228 445 aaKnown RBP21.83■■□□□ 1.09
CPNE1-204ENST00000397443 BYSLQ13895 437 aaKnown RBP21.83■■□□□ 1.09
CPNE1-204ENST00000397443 ALFQ53S48 1182 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 ARTNQ5T4W7 220 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 NPWQ8N729 165 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 CELF6Q96J87 481 aaKnown RBP21.83■■□□□ 1.09
CPNE1-204ENST00000397443 TDP1Q9NUW8 608 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 ZNF148Q9UQR1 794 aa21.83■■□□□ 1.09
CPNE1-204ENST00000397443 MCF2LO15068 1137 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ZNF135P52742 658 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 PRPF38BQ5VTL8 546 aaKnown RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ARID3BQ8IVW6 561 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ZNF683Q8IZ20 524 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 C12orf50Q8NA57 414 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 RIN3Q8TB24 985 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ZSCAN18Q8TBC5 510 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 BHMTQ93088 406 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 GAS2L1Q99501 681 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 TMEM121Q9BTD3 319 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 HOMER3Q9NSC5 361 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 NDFIP2Q9NV92 336 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 DTLQ9NZJ0 730 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ARHGAP26Q9UNA1 814 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 H7C0C1 242 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 GREM1O60565 184 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 PFKLP17858 780 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ATP5OP48047 213 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 NUMBP49757 651 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 DR1Q01658 176 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 NRG1Q02297 640 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-204ENST00000397443 NOMO1Q15155 1222 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ELF2Q15723 593 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ADGRF1Q5T601 910 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 BBS7Q8IWZ6 715 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 ZYG11BQ9C0D3 744 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 CATSPERBQ9H7T0 1116 aa21.82■■□□□ 1.08
CPNE1-204ENST00000397443 UQCRHLA0A096LP55 91 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 UQCRHP07919 91 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 RBP3P10745 1247 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 SGSHP51688 502 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 RPS24P62847 133 aaKnown RBP21.81■■□□□ 1.08
CPNE1-204ENST00000397443 GSTA5Q7RTV2 222 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 PRUNE1Q86TP1 453 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 NPAS3Q8IXF0 933 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 CCDC26Q8TAB7 109 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 TRIM51Q9BSJ1 452 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 ADAM7Q9H2U9 754 aa21.81■■□□□ 1.08
CPNE1-204ENST00000397443 ZFP37Q9Y6Q3 630 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-204ENST00000397443 HELZP42694 1942 aaKnown RBP21.81■■□□□ 1.08
CPNE1-204ENST00000397443 FGF10O15520 208 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 HOXB8P17481 243 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 HOXC13P31276 330 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 FNTAP49354 379 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 MTA1Q13330 715 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 TRIP13Q15645 432 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 CCDC70Q6NSX1 233 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 CES5AQ6NT32 575 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 DARS2Q6PI48 645 aaKnown RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 Q6ZNB5 142 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 Q7L0L9 218 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 SLC35B2Q8TB61 432 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 FGF13Q92913 245 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 PRICKLE1Q96MT3 831 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 CLUHO75153 1309 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 ZSCAN5CA6NGD5 496 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 PAPLNO95428 1278 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 PAFAH1B3Q15102 231 aaKnown RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 CCDC85BQ15834 202 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 ATAT1Q5SQI0 421 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 AZIN2Q96A70 460 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 TRIM31Q9BZY9 425 aa21.8■■□□□ 1.08
CPNE1-204ENST00000397443 DMGDHQ9UI17 866 aaKnown RBP21.8■■□□□ 1.08
CPNE1-204ENST00000397443 DOCK4Q8N1I0 1966 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 SGK1O00141 431 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 DFFAO00273 331 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 HTR7P34969 479 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 LTBRP36941 435 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 CTC1Q2NKJ3 1217 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 HTR3DQ70Z44 454 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 MAATS1Q7Z4T9 603 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 RTL3Q8N8U3 475 aaKnown RBP21.79■■□□□ 1.08
CPNE1-204ENST00000397443 CCNYQ8ND76 341 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 ATL2Q8NHH9 583 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 LGMNQ99538 433 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 PCYOX1Q9UHG3 505 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 PRUNE2Q8WUY3 3088 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 UNC80Q8N2C7 3258 aa21.79■■□□□ 1.08
CPNE1-204ENST00000397443 IGLV3-10A0A075B6K4 115 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 CTIFO43310 598 aaKnown RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 HEXIM1O94992 359 aaKnown RBP21.78■■□□□ 1.08
CPNE1-204ENST00000397443 ECEL1O95672 775 aa21.78■■□□□ 1.08
CPNE1-204ENST00000397443 IFNB1P01574 187 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms