RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MIB1Q86YT6 1006 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 ARFGAP2Q8N6H7 521 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 MAB21L3Q8N8X9 362 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 CENPIQ92674 756 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 PGAP3Q96FM1 320 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 PGM2Q96G03 612 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 RIPOR3Q96MK2 946 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 NCAPGQ9BPX3 1015 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 ADAM33Q9BZ11 813 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 S1PR5Q9H228 398 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 SEMA4AQ9H3S1 761 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 CLUHO75153 1309 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 SOBPA7XYQ1 873 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 NRG2O14511 850 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 EIF3HO15372 352 aaKnown RBP eCLIP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 F9P00740 461 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 IGLV3-25P01717 112 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CEBPBP17676 345 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 HDCP19113 662 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 FSHRP23945 695 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ARSEP51690 589 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 SLC29A2Q14542 456 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 KRT71Q3SY84 523 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 TNFAIP8L3Q5GJ75 292 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 STXBP5Q5T5C0 1151 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 KAZNQ674X7 775 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 HIBCHQ6NVY1 386 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ARL14EPQ8N8R7 260 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 TTC13Q8NBP0 860 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ITFG1Q8TB96 612 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ING5Q8WYH8 240 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CDC42EP4Q9H3Q1 356 aaKnown RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 TASP1Q9H6P5 420 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 LRRC4CQ9HCJ2 640 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 WDR6Q9NNW5 1121 aaKnown RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 TMEM51Q9NW97 253 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CALCOCO1Q9P1Z2 691 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 SLC12A6Q9UHW9 1150 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CD207Q9UJ71 328 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CDH22Q9UJ99 828 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 USP18Q9UMW8 372 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 SLC12A8A0AV02 714 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 IRAK2O43187 625 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 MSI1O43347 362 aaKnown RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CKMP06732 381 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 MBL2P11226 248 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CHKAP35790 457 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 MTHFRP42898 656 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 KPNA1P52294 538 aaPredicted RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 HDAC4P56524 1084 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ZSCAN26Q16670 478 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 RAB6CQ53S08 254 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ODF2Q5BJF6 829 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 UBAP2Q5T6F2 1119 aaKnown RBP15.39■□□□□ 0.05
CAPN3-207ENST00000397200 SCYL2Q6P3W7 929 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 BNIPLQ7Z465 357 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 VSIG1Q86XK7 387 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 RNF34Q969K3 372 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 PEBP4Q96S96 227 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 CYP2S1Q96SQ9 504 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 FAM118BQ9BPY3 351 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 RNF38Q9H0F5 515 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 RAB6CQ9H0N0 254 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 ZWILCHQ9H900 591 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 PCDH9Q9HC56 1237 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 PIGVQ9NUD9 493 aa15.39■□□□□ 0.05
CAPN3-207ENST00000397200 HELZP42694 1942 aaKnown RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 DNALI1O14645 258 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 NDC80O14777 642 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 OLFM2O95897 454 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 IVLP07476 585 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 AVPR1AP37288 418 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 ADCY8P40145 1251 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 ATXN1P54253 815 aaKnown RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 TBX4P57082 545 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 GNGT1P63211 74 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 TRIP4Q15650 581 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 ZFYVE27Q5T4F4 411 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 IZUMO3Q5VZ72 239 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 CEP128Q6ZU80 1094 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 GET4Q7L5D6 327 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 SMRP1Q8NCR6 262 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 SLC22A12Q96S37 553 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 SLC46A2Q9BY10 475 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 UBE2ZQ9H832 354 aaPredicted RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 ANAPC5Q9UJX4 755 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 TLR6Q9Y2C9 796 aa15.38■□□□□ 0.05
CAPN3-207ENST00000397200 HBS1LQ9Y450 684 aaKnown RBP15.38■□□□□ 0.05
CAPN3-207ENST00000397200 ZNF487B1APH4 448 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 H3BQ06 376 aaPredicted RBP15.37■□□□□ 0.05
CAPN3-207ENST00000397200 PRPSAP2O60256 369 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 HMBSP08397 361 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 KCNA5P22460 613 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 CXCR3P49682 368 aa15.37■□□□□ 0.05
CAPN3-207ENST00000397200 COG7P83436 770 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms