RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ACMSDQ8TDX5 336 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RTP4Q96DX8 246 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 SORT1Q99523 831 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 XPNPEP3Q9NQH7 507 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 C6orf203Q9P0P8 240 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 TXNDC16Q9P2K2 825 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 DCDC2Q9UHG0 476 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 SSX2IPQ9Y2D8 614 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 STRNO43815 780 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 DNAJA2O60884 412 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 SRGAP2BP0DMP2 458 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ZFXP17010 805 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 NUDT2P50583 147 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 MRPS22P82650 360 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CNTN2Q02246 1040 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 KLF10Q13118 480 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 SURF1Q15526 300 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF534Q76KX8 674 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CDKL3Q8IVW4 592 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PCDH19Q8TAB3 1148 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RBM38Q9H0Z9 239 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PIH1D1Q9NWS0 290 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 HTR3EA5X5Y0 456 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 DENRO43583 198 aaKnown RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 CRTAMO95727 393 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 HSPA4LO95757 839 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GSTT2P0CG29 244 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GSTT2BP0CG30 244 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 TYK2P29597 1187 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 ARRB2P32121 409 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GMPRP36959 345 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 MAGEA6P43360 314 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 KPNA1P52294 538 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 HDAC4P56524 1084 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 MYBPC1Q00872 1141 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GRM1Q13255 1194 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 ATP1A4Q13733 1029 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 PDK2Q15119 407 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 STXBP5Q5T5C0 1151 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 PACS1Q6VY07 963 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 CYP4V2Q6ZWL3 525 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 RAVER1Q8IY67 606 aaKnown RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 SERPINI1Q99574 410 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 GCOM2Q9BZD3 368 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-206ENST00000397163 FAIMQ9NVQ4 179 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 MOCS1Q9NZB8 636 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM216Q9P0N5 145 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 TSC22D4Q9Y3Q8 395 aa9.4□□□□□ -0.9
CAPN3-206ENST00000397163 C2CD4BA6NLJ0 364 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 CFLARO15519 480 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ADCY6O43306 1168 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ZBTB14O43829 449 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 TNFAIP8O95379 198 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 HOXC6P09630 235 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 IL4RP24394 825 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ACAT1P24752 427 aaKnown RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 SERPINB5P36952 375 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 SESN2P58004 480 aaPredicted RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 FLOT2Q14254 428 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 SNRNP48Q6IEG0 339 aaKnown RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 TRNP1Q6NT89 227 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 CDR2LQ86X02 465 aaPredicted RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 PIWIL1Q96J94 861 aaKnown RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF512Q96ME7 567 aaPredicted RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 RTKNQ9BST9 563 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 MRPS26Q9BYN8 205 aaKnown RBP9.4□□□□□ -0.91
CAPN3-206ENST00000397163 COG4Q9H9E3 785 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 COPG2Q9UBF2 871 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 DMTF1Q9Y222 760 aa9.4□□□□□ -0.91
CAPN3-206ENST00000397163 ARHGAP10A1A4S6 786 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 VWA5AO00534 786 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 FBP2O00757 339 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 FAM189A1O60320 539 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CPA3P15088 417 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 MX2P20592 715 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CHRNA5P30532 468 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 MAGEA3P43357 314 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SP2Q02086 613 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CBLBQ13191 982 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CA9Q16790 459 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 BOLA3Q53S33 107 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 STYK1Q6J9G0 422 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SLC7A5P1Q8MH63 180 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 NUP93Q8N1F7 819 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM130Q8N3G9 435 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PGBD4Q96DM1 585 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms