RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF234Q14588 700 aa15.07■□□□□ 0
SEC13-208ENST00000397109 FAM102AQ5T9C2 384 aaPredicted RBP15.07■□□□□ 0
SEC13-208ENST00000397109 TMEM215Q68D42 235 aa15.07■□□□□ 0
SEC13-208ENST00000397109 SND1Q7KZF4 910 aaKnown RBP eCLIP15.07■□□□□ 03e-11■■■□□ 16.6
SEC13-208ENST00000397109 LGI2Q8N0V4 545 aa15.07■□□□□ 0
SEC13-208ENST00000397109 SLC20A1Q8WUM9 679 aa15.07■□□□□ 0
SEC13-208ENST00000397109 BAP1Q92560 729 aa15.07■□□□□ 0
SEC13-208ENST00000397109 PRICKLE1Q96MT3 831 aaPredicted RBP15.07■□□□□ 0
SEC13-208ENST00000397109 NPY6RQ99463 290 aa15.07■□□□□ 0
SEC13-208ENST00000397109 CD248Q9HCU0 757 aa15.07■□□□□ 0
SEC13-208ENST00000397109 COX16Q9P0S2 106 aa15.07■□□□□ 0
SEC13-208ENST00000397109 INVSQ9Y283 1065 aa15.07■□□□□ 0
SEC13-208ENST00000397109 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
SEC13-208ENST00000397109 CEP250Q9BV73 2442 aa15.06■□□□□ 0
SEC13-208ENST00000397109 GON4LQ3T8J9 2241 aa15.06■□□□□ 0
SEC13-208ENST00000397109 PRR5-ARHGAP8B1AHC4 643 aa15.06■□□□□ 0
SEC13-208ENST00000397109 WASH3PC4AMC7 463 aa15.06■□□□□ 0
SEC13-208ENST00000397109 ZNF217O75362 1048 aa15.06■□□□□ 0
SEC13-208ENST00000397109 GYPCP04921 128 aa15.06■□□□□ 0
SEC13-208ENST00000397109 CHRNB2P17787 502 aa15.06■□□□□ 0
SEC13-208ENST00000397109 POLR2EP19388 210 aaKnown RBP15.06■□□□□ 0
SEC13-208ENST00000397109 SDHBP21912 280 aa15.06■□□□□ 0
SEC13-208ENST00000397109 IL12RB1P42701 662 aa15.06■□□□□ 0
SEC13-208ENST00000397109 ARHGAP8P85298 464 aa15.06■□□□□ 0
SEC13-208ENST00000397109 NME3Q13232 169 aa15.06■□□□□ 0
SEC13-208ENST00000397109 CDH18Q13634 790 aa15.06■□□□□ 0
SEC13-208ENST00000397109 CSRP2Q16527 193 aa15.06■□□□□ 0
SEC13-208ENST00000397109 BRMS1LQ5PSV4 323 aa15.06■□□□□ 0
SEC13-208ENST00000397109 RABGAP1LQ5R372 815 aa15.06■□□□□ 0
SEC13-208ENST00000397109 TTC39BQ5VTQ0 682 aaPredicted RBP15.06■□□□□ 0
SEC13-208ENST00000397109 RAP1GAP2Q684P5 730 aa15.06■□□□□ 0
SEC13-208ENST00000397109 MBLAC2Q68D91 279 aa15.06■□□□□ 0
SEC13-208ENST00000397109 KIAA1211LQ6NV74 962 aa15.06■□□□□ 0
SEC13-208ENST00000397109 ARCQ7LC44 396 aa15.06■□□□□ 0
SEC13-208ENST00000397109 NT5C3BQ969T7 300 aa15.06■□□□□ 0
SEC13-208ENST00000397109 PGAP3Q96FM1 320 aaPredicted RBP15.06■□□□□ 0
SEC13-208ENST00000397109 PARD6AQ9NPB6 346 aa15.06■□□□□ 0
SEC13-208ENST00000397109 SEMA4GQ9NTN9 838 aa15.06■□□□□ 0
SEC13-208ENST00000397109 XPO7Q9UIA9 1087 aaKnown RBP15.06■□□□□ 0
SEC13-208ENST00000397109 CAPN11Q9UMQ6 739 aa15.06■□□□□ 0
SEC13-208ENST00000397109 THADAQ6YHU6 1953 aa15.06■□□□□ 0
SEC13-208ENST00000397109 H0Y626 953 aa15.05■□□□□ -0
SEC13-208ENST00000397109 MAP3K13O43283 966 aa15.05■□□□□ -0
SEC13-208ENST00000397109 LUC7L3O95232 432 aaKnown RBP15.05■□□□□ -0
SEC13-208ENST00000397109 MOCS3O95396 460 aa15.05■□□□□ -0
SEC13-208ENST00000397109 DLDP09622 509 aaKnown RBP15.05■□□□□ -0
SEC13-208ENST00000397109 FERP16591 822 aa15.05■□□□□ -0
SEC13-208ENST00000397109 NDUFV2P19404 249 aa15.05■□□□□ -0
SEC13-208ENST00000397109 MMP8P22894 467 aa15.05■□□□□ -0
SEC13-208ENST00000397109 MAP7D1Q3KQU3 841 aa15.05■□□□□ -0
SEC13-208ENST00000397109 SLC25A52Q3SY17 297 aa15.05■□□□□ -0
SEC13-208ENST00000397109 SPDYCQ5MJ68 293 aa15.05■□□□□ -0
SEC13-208ENST00000397109 ACBD5Q5T8D3 534 aaPredicted RBP15.05■□□□□ -0
SEC13-208ENST00000397109 PMS2CLQ68D20 193 aa15.05■□□□□ -0
SEC13-208ENST00000397109 SERPINA13PQ6UXR4 307 aa15.05■□□□□ -0
SEC13-208ENST00000397109 SLC36A4Q6YBV0 504 aa15.05■□□□□ -0
SEC13-208ENST00000397109 LPCAT2Q7L5N7 544 aa15.05■□□□□ -0
SEC13-208ENST00000397109 ADIPOR2Q86V24 386 aa15.05■□□□□ -0
SEC13-208ENST00000397109 CFAP52Q8N1V2 620 aa15.05■□□□□ -0
SEC13-208ENST00000397109 CARNMT1Q8N4J0 409 aa15.05■□□□□ -0
SEC13-208ENST00000397109 RLN3Q8WXF3 142 aa15.05■□□□□ -0
SEC13-208ENST00000397109 SORCS1Q8WY21 1168 aa15.05■□□□□ -0
SEC13-208ENST00000397109 ARRDC1-AS1Q9H2J1 176 aa15.05■□□□□ -0
SEC13-208ENST00000397109 WDCPQ9H6R7 721 aa15.05■□□□□ -0
SEC13-208ENST00000397109 CALCOCO1Q9P1Z2 691 aa15.05■□□□□ -0
SEC13-208ENST00000397109 KIAA1522Q9P206 1035 aaPredicted RBP15.05■□□□□ -0
SEC13-208ENST00000397109 RAD54BQ9Y620 910 aa15.05■□□□□ -0
SEC13-208ENST00000397109 PLXND1Q9Y4D7 1925 aa15.05■□□□□ -0
SEC13-208ENST00000397109 GOLGA6L9A6NEM1 432 aa15.04■□□□□ -0
SEC13-208ENST00000397109 GOLGA8SH3BPF8 625 aa15.04■□□□□ -0
SEC13-208ENST00000397109 ASLP04424 464 aa15.04■□□□□ -0
SEC13-208ENST00000397109 CD70P32970 193 aa15.04■□□□□ -0
SEC13-208ENST00000397109 CXCR3P49682 368 aa15.04■□□□□ -0
SEC13-208ENST00000397109 SULT1E1P49888 294 aa15.04■□□□□ -0
SEC13-208ENST00000397109 OXCT1P55809 520 aa15.04■□□□□ -0
SEC13-208ENST00000397109 DEUP1Q05D60 604 aa15.04■□□□□ -0
SEC13-208ENST00000397109 ARID5BQ14865 1188 aa15.04■□□□□ -0
SEC13-208ENST00000397109 FUT11Q495W5 492 aa15.04■□□□□ -0
SEC13-208ENST00000397109 FNDC3BQ53EP0 1204 aaKnown RBP15.04■□□□□ -0
SEC13-208ENST00000397109 DNTTIP2Q5QJE6 756 aaKnown RBP15.04■□□□□ -0
SEC13-208ENST00000397109 METTL3Q86U44 580 aaKnown RBP15.04■□□□□ -0
SEC13-208ENST00000397109 TC2NQ8N9U0 490 aa15.04■□□□□ -0
SEC13-208ENST00000397109 WFDC5Q8TCV5 224 aa15.04■□□□□ -0
SEC13-208ENST00000397109 TTC17Q96AE7 1141 aa15.04■□□□□ -0
SEC13-208ENST00000397109 MYEOVQ96EZ4 313 aa15.04■□□□□ -0
SEC13-208ENST00000397109 LMLNQ96KR4 655 aa15.04■□□□□ -0
SEC13-208ENST00000397109 MRGPRX1Q96LB2 322 aa15.04■□□□□ -0
SEC13-208ENST00000397109 PRMT1Q99873 361 aaKnown RBP15.04■□□□□ -0
SEC13-208ENST00000397109 BAG1Q99933 345 aaPredicted RBP15.04■□□□□ -0
SEC13-208ENST00000397109 TMEM59LQ9UK28 342 aa15.04■□□□□ -0
SEC13-208ENST00000397109 BCLAF3A2AJT9 711 aaKnown RBP15.03■□□□□ -0
SEC13-208ENST00000397109 ZSCAN12O43309 604 aa15.03■□□□□ -0
SEC13-208ENST00000397109 EPHX1P07099 455 aa15.03■□□□□ -0
SEC13-208ENST00000397109 ZNF806P0C7X5 589 aa15.03■□□□□ -0
SEC13-208ENST00000397109 UNGP13051 313 aaPredicted RBP15.03■□□□□ -0
SEC13-208ENST00000397109 BCKDHBP21953 392 aa15.03■□□□□ -0
SEC13-208ENST00000397109 FECHP22830 423 aa15.03■□□□□ -0
SEC13-208ENST00000397109 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
SEC13-208ENST00000397109 ID4P47928 161 aa15.03■□□□□ -0
SEC13-208ENST00000397109 ZBED6P86452 979 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms