RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ARID5BQ14865 1188 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 ARHGAP17Q68EM7 881 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 DHX40Q8IX18 779 aaKnown RBP15.56■□□□□ 0.08
SEC13-206ENST00000397102 TTC39CQ8N584 583 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 ANKRD52Q8NB46 1076 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 KDM1BQ8NB78 822 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 KIAA0895Q8NCT3 520 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 CCDC150Q8NCX0 1101 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 RNF139Q8WU17 664 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 SERAC1Q96JX3 654 aa15.56■□□□□ 0.08
SEC13-206ENST00000397102 MYO18BQ8IUG5 2567 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 KLRC4O43908 158 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 TBL1XO60907 577 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 GCLMP48507 274 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 UCNP55089 124 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 PCBP4P57723 403 aaKnown RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 TMPRSS3P57727 454 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 E2F1Q01094 437 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 PROX2Q3B8N5 592 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 PKDCCQ504Y2 493 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 PIK3R6Q5UE93 754 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 BROXQ5VW32 411 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
SEC13-206ENST00000397102 MMAAQ8IVH4 418 aaKnown RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 MFN1Q8IWA4 741 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 SLC4A11Q8NBS3 891 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 NDRG1Q92597 394 aaKnown RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 LMLNQ96KR4 655 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 MRGPRX3Q96LB0 322 aa15.55■□□□□ 0.08
SEC13-206ENST00000397102 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
SEC13-206ENST00000397102 TARSL2A2RTX5 802 aaKnown RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 IRAK2O43187 625 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 MSI1O43347 362 aaKnown RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 YEATS4O95619 227 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 MT-CO3P00414 261 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 TRIM49P0CI25 452 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 TRIM49CP0CI26 452 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 SLC8A1P32418 973 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 CSKP41240 450 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 RAD23BP54727 409 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 ADPRHP54922 357 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 PPP3CAQ08209 521 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 C9orf64Q5T6V5 341 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 BSPRYQ5W0U4 402 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 NAPEPLDQ6IQ20 393 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 RFWD3Q6PCD5 774 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 KDM7AQ6ZMT4 941 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 INTS8Q75QN2 995 aaKnown RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 SPATS2Q86XZ4 545 aaKnown RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 MFSD2AQ8NA29 543 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 FIBINQ8TAL6 211 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 EDEM1Q92611 657 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 ZNF578Q96N58 590 aaPredicted RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 LRRC4Q9HBW1 653 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 CISHQ9NSE2 258 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 ABCC13Q9NSE7 274 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 EXOC1Q9NV70 894 aa15.54■□□□□ 0.08
SEC13-206ENST00000397102 INTS6Q9UL03 887 aaKnown RBP15.54■□□□□ 0.08
SEC13-206ENST00000397102 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 TULP2O00295 520 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 XPO1O14980 1071 aaKnown RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 LATO43561 262 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 CALUO43852 315 aaPredicted RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 MAGEC1O60732 1142 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 GOT1P17174 413 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 SLC6A4P31645 630 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 ENPEPQ07075 957 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 GRAMD1CQ8IYS0 662 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 AADATQ8N5Z0 425 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 OR14C36Q8NHC7 312 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 NAF1Q96HR8 494 aaKnown RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 HIC2Q96JB3 615 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 IPO9Q96P70 1041 aaKnown RBP15.53■□□□□ 0.08
SEC13-206ENST00000397102 CLMPQ9H6B4 373 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 TRAF3IP3Q9Y228 551 aa15.53■□□□□ 0.08
SEC13-206ENST00000397102 MGAQ8IWI9 3026 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 NAV2Q8IVL1 2488 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 EDDM13A0A1B0GTR0 161 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 YJEFN3A6XGL0 299 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 B8ZZF3 427 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 E7ENQ6 273 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 ACSL4O60488 711 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 ADH1BP00325 375 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 IGLV3-27P01718 113 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 SRPRAP08240 638 aaKnown RBP15.52■□□□□ 0.08
SEC13-206ENST00000397102 PDIA4P13667 645 aaKnown RBP15.52■□□□□ 0.08
SEC13-206ENST00000397102 C5AR1P21730 350 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 PSMD8P48556 350 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 SLC11A2P49281 568 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 PPP2CBP62714 309 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 PPP2CAP67775 309 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 ADIGQ0VDE8 80 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 OVGP1Q12889 678 aa15.52■□□□□ 0.08
SEC13-206ENST00000397102 GOLGA7BQ2TAP0 167 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms