RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 DMAP1Q9NPF5 467 aaPredicted RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 CD93Q9NPY3 652 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 HMGXB4Q9UGU5 601 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 SLC27A6Q9Y2P4 619 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 FLNBO75369 2602 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 KALRNO60229 2985 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 NEDD8-MDP1E9PL57 170 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 CLDN5O00501 218 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 AKR1B10O60218 316 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 TLR5O60602 858 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 C7P10643 843 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 VDRP11473 427 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 NCAM1P13591 858 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 CYP11B1P15538 503 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 BRD2P25440 801 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 DGKGP49619 791 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 C19orf57Q0VDD7 668 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 SMAD1Q15797 465 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 E4F1Q66K89 784 aaPredicted RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 KLHDC10Q6PID8 442 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 KIAA1324Q6UXG2 1013 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 IRF2BP2Q7Z5L9 587 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 ZCCHC9Q8N567 271 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 PDCD7Q8N8D1 485 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 SLC4A11Q8NBS3 891 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 LSM14AQ8ND56 463 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 C1orf216Q8TAB5 229 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 SCAMP5Q8TAC9 235 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 WBP2Q969T9 261 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 TWNKQ96RR1 684 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 KCNK16Q96T55 309 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 AGPAT1Q99943 283 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 KLF16Q9BXK1 252 aaPredicted RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 NACA2Q9H009 215 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 FBXO44Q9H4M3 255 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 ACP6Q9NPH0 428 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 CYLDQ9NQC7 956 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 LSM7Q9UK45 103 aaKnown RBP14.24□□□□□ -0.13
SEC13-205ENST00000397101 KIAA1257Q9ULG3 409 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 RAD54BQ9Y620 910 aa14.24□□□□□ -0.13
SEC13-205ENST00000397101 ASXL3Q9C0F0 2248 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 TRABD2BA6NFA1 517 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 HNRNPH3P31942 346 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 CYLC1P35663 651 aaPredicted RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 EIF4A3P38919 411 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 BNC1Q01954 994 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 CYP4F3Q08477 520 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 HLA-BQ31612 363 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 FUT11Q495W5 492 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 DCAF12L1Q5VU92 463 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 SMYD5Q6GMV2 418 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 WDR59Q6PJI9 974 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 PAQR9Q6ZVX9 377 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 NOP9Q86U38 636 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 FAM35AQ86V20 835 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 RHBDD1Q8TEB9 315 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 CHP1Q99653 195 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 GPR174Q9BXC1 333 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 MKRN2Q9H000 416 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 SLC6A17Q9H1V8 727 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 NHEJ1Q9H9Q4 299 aaPredicted RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 IL21RQ9HBE5 538 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 CSNK1G1Q9HCP0 422 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 OSGEPQ9NPF4 335 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 TLR8Q9NR97 1041 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 FAM49BQ9NUQ9 324 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 GMIPQ9P107 970 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 THAP10Q9P2Z0 257 aaPredicted RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 HESX1Q9UBX0 185 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 FNDC3AQ9Y2H6 1198 aaKnown RBP14.23□□□□□ -0.13
SEC13-205ENST00000397101 CEP83Q9Y592 693 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 STON1Q9Y6Q2 735 aa14.23□□□□□ -0.13
SEC13-205ENST00000397101 TNFSF14O43557 240 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
SEC13-205ENST00000397101 MMEP08473 750 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
SEC13-205ENST00000397101 ATXN1LP0C7T5 689 aaKnown RBP14.22□□□□□ -0.13
SEC13-205ENST00000397101 ADORA2BP29275 332 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 ATP5C1P36542 298 aaKnown RBP14.22□□□□□ -0.13
SEC13-205ENST00000397101 PRKCIP41743 596 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 TPMTP51580 245 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 STILQ15468 1287 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 MEA1Q16626 185 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 PTPRNQ16849 979 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
SEC13-205ENST00000397101 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 CRYBG2Q8N1P7 616 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 C12orf29Q8N999 325 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 SLC20A1Q8WUM9 679 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 ZNF606Q8WXB4 792 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 ARHGAP20Q9P2F6 1191 aa14.22□□□□□ -0.13
SEC13-205ENST00000397101 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.13
SEC13-205ENST00000397101 FAM170AA1A519 330 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms