RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PLEKHG6Q3KR16 790 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 SMYD5Q6GMV2 418 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 GJB7Q6PEY0 223 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
NEDD8-202ENST00000396828 TMTC1Q8IUR5 882 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ARHGEF19Q8IW93 802 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 FAM217AQ8IXS0 508 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 CPXM2Q8N436 756 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ZCCHC9Q8N567 271 aaKnown RBP10.76□□□□□ -0.69
NEDD8-202ENST00000396828 UBR7Q8N806 425 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ZNF366Q8N895 744 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 PNPLA1Q8N8W4 532 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 DDI1Q8WTU0 396 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 CYB5D2Q8WUJ1 264 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 DNASE2BQ8WZ79 361 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ZSWIM1Q9BR11 485 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 UBXN6Q9BZV1 441 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 AIPL1Q9NZN9 384 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ZNF510Q9Y2H8 683 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 NEUROG3Q9Y4Z2 214 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 BZW2Q9Y6E2 419 aaKnown RBP10.76□□□□□ -0.69
NEDD8-202ENST00000396828 KNL1Q8NG31 2342 aa10.76□□□□□ -0.69
NEDD8-202ENST00000396828 ZBTB24O43167 697 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 MSI1O43347 362 aaKnown RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 CAPNS1P04632 268 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 SERPING1P05155 500 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 EPHX1P07099 455 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 SKILP12757 684 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 NCAM1P13591 858 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 HOXD9P28356 352 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 HLA-FP30511 346 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 HNRNPH3P31942 346 aaKnown RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 SOX5P35711 763 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 USP8P40818 1118 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 CDK17Q00537 523 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 STARD3Q14849 445 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 DCAF12L1Q5VU92 463 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 BSPRYQ5W0U4 402 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 RSRC2Q7L4I2 434 aaKnown RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 ANKS1BQ7Z6G8 1248 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 FAM124AQ86V42 546 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 C1orf216Q8TAB5 229 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 WFDC5Q8TCV5 224 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 TFAP2BQ92481 460 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 KAT5Q92993 513 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 ZNF830Q96NB3 372 aaPredicted RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 CDK5RAP1Q96SZ6 601 aaKnown RBP10.75□□□□□ -0.69
NEDD8-202ENST00000396828 DCLK3Q9C098 648 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 CIPCQ9C0C6 399 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 PLXNB3Q9ULL4 1909 aa10.75□□□□□ -0.69
NEDD8-202ENST00000396828 GOLGA6L7A0A1B0GV03 622 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 METTL12A8MUP2 240 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 O00370 1275 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ARHGAP6O43182 974 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 CBFA2T3O75081 653 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 GFPT2O94808 682 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 SYPP08247 313 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 LCP1P13796 627 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ACSL1P33121 698 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 RGS7P49802 495 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ARID5AQ03989 594 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 TRIP6Q15654 476 aaKnown RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 MEA1Q16626 185 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 PTPRNQ16849 979 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 PKDCCQ504Y2 493 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 RAB44Q7Z6P3 723 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 SLCO6A1Q86UG4 719 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ADIPOR2Q86V24 386 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ARHGAP18Q8N392 663 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 TTC39CQ8N584 583 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 CLEC4CQ8WTT0 213 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ZCCHC14Q8WYQ9 949 aaKnown RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 SHC3Q92529 594 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 PRCCQ92733 491 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 FOXJ1Q92949 421 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 PLD4Q96BZ4 506 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 MYEOVQ96EZ4 313 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 SIPA1Q96FS4 1042 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 KREMEN1Q96MU8 473 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 DNAI2Q9GZS0 605 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 TMEM245Q9H330 911 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 MTG2Q9H4K7 406 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 FAM124BQ9H5Z6 455 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 C6orf106Q9H6K1 298 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 EIF2B4Q9UI10 523 aaKnown RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 AJAP1Q9UKB5 411 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.74□□□□□ -0.69
NEDD8-202ENST00000396828 TMEM131Q92545 1883 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 ATRXP46100 2492 aa10.74□□□□□ -0.69
NEDD8-202ENST00000396828 IGSF10Q6WRI0 2623 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 A0A1B0GTW7 788 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 MEI4A8MW99 385 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 FOXN3O00409 490 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SYNCRIPO60506 623 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms