RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PFKLP17858 780 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 HDCP19113 662 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 ECHS1P30084 290 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 CHRNA3P32297 505 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 GRIK1P39086 918 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 BCAT1P54687 386 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 SLC8A3P57103 927 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 ORC1Q13415 861 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 PPP1R26Q5T8A7 1209 aaPredicted RBP18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 DENND5BQ6ZUT9 1274 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 SYT13Q7L8C5 426 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 MREGQ8N565 214 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 C12orf50Q8NA57 414 aaPredicted RBP18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 ANKRD52Q8NB46 1076 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 RPLP0P6Q8NHW5 317 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 CNTNAP3BQ96NU0 1288 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 HHIPQ96QV1 700 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 HNRNPABQ99729 332 aaKnown RBP18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 TTLL2Q9BWV7 592 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 CNTNAP3Q9BZ76 1288 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 ARRDC1-AS1Q9H2J1 176 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 PCYOX1Q9UHG3 505 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 NFU1Q9UMS0 254 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 NME7Q9Y5B8 376 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 KIAA1549LQ6ZVL6 1849 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 AXIN1O15169 862 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 TTI1O43156 1089 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 ADRB1P08588 477 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 PTPN1P18031 435 aaKnown RBP18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 ZXDBP98169 803 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 GABPB1Q06547 395 aaPredicted RBP18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 PDCLQ13371 301 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 PTPN20Q4JDL3 420 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 PPM1JQ5JR12 505 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 DNAJC24Q6P3W2 148 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 RHOT1Q8IXI2 618 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 C12orf29Q8N999 325 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 ZC3H10Q96K80 434 aaKnown RBP18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 LINC00597Q9H2U6 94 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 MYO16Q9Y6X6 1858 aa18.11■□□□□ 0.49
TNFSF13-205ENST00000396545 TRIM66O15016 1216 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 ZNF806P0C7X5 589 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 PTGIRP43119 386 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 ZNF252P-AS1Q0IIN9 211 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 BST2Q10589 180 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 SF3A2Q15428 464 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 TRADDQ15628 312 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 ADAT2Q7Z6V5 191 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 ZDHHC17Q8IUH5 632 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 NIPA2Q8N8Q9 360 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 SLC35F5Q8WV83 523 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 IFT81Q8WYA0 676 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 ACDQ96AP0 544 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 HSFY1Q96LI6 401 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 RUNDC3BQ96NL0 473 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 RAB17Q9H0T7 212 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
TNFSF13-205ENST00000396545 MAP1BP46821 2468 aaKnown RBP18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 ZNF840PA6NDX5 716 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 SIGLEC16A6NMB1 481 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 F8VP50 259 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 GJB6O95452 261 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 FAM153BP0C7A2 387 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 RARAP10276 462 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 ACADSBP45954 432 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 LIMK1P53667 647 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 TAS2R40P59535 323 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 RPL7AP62424 266 aaKnown RBP18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 DR1Q01658 176 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 NR1H3Q13133 447 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 CCDC6Q16204 474 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 FAM153CQ494X1 144 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 AASDHQ4L235 1098 aaPredicted RBP18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 PLA2G2CQ5R387 149 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 KATNAL2Q8IYT4 538 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 FNIP1Q8TF40 1166 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 MAIP1Q8WWC4 291 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 C8orf48Q96LL4 319 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 DPEP3Q9H4B8 488 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 FAM114A2Q9NRY5 505 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 EBF1Q9UH73 591 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 FAM153AQ9UHL3 310 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 UTP11Q9Y3A2 253 aaKnown RBP18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 PCDHGA5Q9Y5G8 931 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 CEP295Q9C0D2 2601 aa18.09■□□□□ 0.49
TNFSF13-205ENST00000396545 TCRBV7S2A1N4TA0A589 114 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 NFATC1O95644 943 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 APBB3O95704 486 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 OLFM2O95897 454 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 SCNN1AP37088 669 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 PPP3CCP48454 512 aa18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 RPL34P49207 117 aaKnown RBP18.08■□□□□ 0.49
TNFSF13-205ENST00000396545 FNTAP49354 379 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms