RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DCAF4L1Q3SXM0 396 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 NCBP2-AS2Q69YL0 99 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 LRRC8BQ6P9F7 803 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ARID3BQ8IVW6 561 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 LRRC52Q8N7C0 313 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 GPRC5AQ8NFJ5 357 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 DTNBP1Q96EV8 351 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 MIS12Q9H081 205 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 IQCGQ9H095 443 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ARHGEF4Q9NR80 690 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TRDMT1O14717 391 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 DGKIO75912 1065 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 PSMD7P51665 324 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 AQP4P55087 323 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TEX44Q53QW1 395 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TTC39BQ5VTQ0 682 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ZDHHC17Q8IUH5 632 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CRYBG2Q8N1P7 616 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 RBM15BQ8NDT2 890 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 IFT43Q96FT9 208 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CFAP36Q96G28 342 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CNBD2Q96M20 576 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ANKRD27Q96NW4 1050 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 QKIQ96PU8 341 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CSPG4P5Q96PW8 444 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 SETD4Q9NVD3 440 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 MKS1Q9NXB0 559 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 PLLPQ9Y342 182 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TFPTP0C1Z6 253 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 GRIA2P42262 883 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 OCRLQ01968 901 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 CBX3Q13185 183 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 XKR4Q5GH76 650 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 GLRA4Q5JXX5 417 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 UNC93AQ86WB7 457 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 GALNT4Q8N4A0 578 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 PPP1R13LQ8WUF5 828 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 LENG1Q96BZ8 264 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 FRMD8Q9BZ67 464 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 NXF3Q9H4D5 531 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 SAR1AQ9NR31 198 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 DTLQ9NZJ0 730 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 STX18Q9P2W9 335 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 ZC3H7BQ9UGR2 993 aaKnown RBP15.97■□□□□ 0.15
PTBP1-204ENST00000394601 LZTS1Q9Y250 596 aa15.97■□□□□ 0.15
PTBP1-204ENST00000394601 TRIM49D1C9J1S8 452 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 APOEP02649 317 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 APRTP07741 180 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 TPSB2P20231 275 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 PEX2P28328 305 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 CDK7P50613 346 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 AP2B1P63010 937 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 TPSAB1Q15661 275 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 DUSP28Q4G0W2 176 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 SCUBE1Q8IWY4 988 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 PYROXD2Q8N2H3 581 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 NME8Q8N427 588 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 CCDC33Q8N5R6 958 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 TMEM40Q8WWA1 233 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 C20orf27Q9GZN8 174 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 MOCS1Q9NZB8 636 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 COL4A4P53420 1690 aaPredicted RBP15.96■□□□□ 0.15
PTBP1-204ENST00000394601 ZBED1O96006 694 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 TKTP29401 623 aaKnown RBP15.96■□□□□ 0.15
PTBP1-204ENST00000394601 SCNN1AP37088 669 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 ANKRD52Q8NB46 1076 aa15.96■□□□□ 0.15
PTBP1-204ENST00000394601 CCDC97Q96F63 343 aaPredicted RBP15.96■□□□□ 0.15
PTBP1-204ENST00000394601 INHBAP08476 426 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 ADAM17P78536 824 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 SNAPC2Q13487 334 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 SEMA5AQ13591 1074 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 SFT2D3Q587I9 215 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 ZCCHC23Q6ZST2 131 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 UTS2BQ765I0 119 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.95■□□□□ 0.146e-7■■□□□ 12.6
PTBP1-204ENST00000394601 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 SIRPGQ9P1W8 387 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 TMCC1O94876 653 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 SOX4Q06945 474 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 UBAP2LQ14157 1087 aaKnown RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 NT5C3BQ969T7 300 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 LRRC39Q96DD0 335 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 EBNA1BP2Q99848 306 aaKnown RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 IKBKGQ9Y6K9 419 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 MYO18AQ92614 2054 aaKnown RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 MBLAC1A4D2B0 266 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 COQ9O75208 318 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 ALDH1A2O94788 518 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 IGFBP6P24592 240 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-204ENST00000394601 STEAP4Q687X5 459 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 PPM1NQ8N819 430 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 AGR3Q8TD06 166 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 MAML3Q96JK9 1138 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 PPP1R36Q96LQ0 422 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 KLC2Q9H0B6 622 aa15.95■□□□□ 0.14
PTBP1-204ENST00000394601 GDAP2Q9NXN4 497 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms