RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PDPK2PQ6A1A2 396 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 TMEM102Q8N9M5 508 aaPredicted RBP19.34■□□□□ 0.69
HOXC6-202ENST00000394331 ZNF778Q96MU6 729 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 TMEM121Q9BTD3 319 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 CLK4Q9HAZ1 481 aaKnown RBP19.34■□□□□ 0.69
HOXC6-202ENST00000394331 OLAHQ9NV23 265 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 ERGIC3Q9Y282 383 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 USTQ9Y2C2 406 aa19.34■□□□□ 0.69
HOXC6-202ENST00000394331 ADGRA2Q96PE1 1338 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 CNTNAP2Q9UHC6 1331 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 hCG_1818297A0A087WSY0 165 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 A0A1B0GTW7 788 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 MCF2LO15068 1137 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 RFPL1O75677 317 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 C1QAP02745 245 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 COX4I1P13073 169 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 BBS9Q3SYG4 887 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 FSCBQ5H9T9 825 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 METTL21CQ5VZV1 264 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 C16orf87Q6PH81 154 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 MFSD7Q6UXD7 560 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 AP4S1Q9Y587 144 aa19.33■□□□□ 0.69
HOXC6-202ENST00000394331 DOCK1Q14185 1865 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 PARP14Q460N5 1801 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 CCDC195A0A1B0GUA6 201 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 FAM47E-STBD1D6RA91 191 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 WEE2P0C1S8 567 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 PABPC1P11940 636 aaKnown RBP19.33■□□□□ 0.68
HOXC6-202ENST00000394331 C16orf89Q6UX73 402 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 CLVS1Q8IUQ0 354 aaPredicted RBP19.33■□□□□ 0.68
HOXC6-202ENST00000394331 NSMCE3Q96MG7 304 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 PSD2Q9BQI7 771 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 MAN1C1Q9NR34 630 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 NRBP2Q9NSY0 501 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.68
HOXC6-202ENST00000394331 A0A087WXM4 84 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 ARHGEF37A1IGU5 675 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 AQP9O43315 295 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 ZBTB41Q5SVQ8 909 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 KAZNQ674X7 775 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 EEPD1Q7L9B9 569 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 CHST13Q8NET6 341 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 OR5B17Q8NGF7 314 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF512Q96ME7 567 aaPredicted RBP19.32■□□□□ 0.68
HOXC6-202ENST00000394331 APOL6Q9BWW8 343 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 COPS7BQ9H9Q2 264 aaPredicted RBP19.32■□□□□ 0.68
HOXC6-202ENST00000394331 PARVBQ9HBI1 364 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 TEX264Q9Y6I9 313 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 WDR81Q562E7 1941 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 IGKV6D-21A0A0A0MT36 114 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM63AO94886 807 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 IFNB1P01574 187 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 KRT1P04264 644 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 MMP8P22894 467 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 IDH3AP50213 366 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 FLOT2Q14254 428 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 TFDP3Q5H9I0 405 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 ZPBP2Q6X784 338 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF606Q8WXB4 792 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 CCDC138Q96M89 665 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 PKP2Q99959 881 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 IFT122Q9HBG6 1241 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 KIAA1217Q5T5P2 1943 aa19.32■□□□□ 0.68
HOXC6-202ENST00000394331 XPO1O14980 1071 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A9O60656 530 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 CALB1P05937 261 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 CCDC130P13994 396 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ATF7P17544 494 aaPredicted RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A6P19224 532 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A1P22309 533 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A4P22310 534 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 DCKP27707 260 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A3P35503 534 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A5P35504 534 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 CCT8P50990 548 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ANKRD60Q9BZ19 345 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A7Q9HAW7 530 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A10Q9HAW8 530 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UGT1A8Q9HAW9 530 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 XPO7Q9UIA9 1087 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 DNAJC16Q9Y2G8 782 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 TRIM64A6NGJ6 449 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 NFKBIEO00221 500 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 GJC1P36383 396 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF132P52740 706 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 MRPS22P82650 360 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 TEDDM1Q5T9Z0 273 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF354CQ86Y25 554 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 APOBEC3FQ8IUX4 373 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 CTRCQ99895 268 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ARMC7Q9H6L4 198 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 RPF2Q9H7B2 306 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 GJA3Q9Y6H8 435 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 PFDN6O15212 129 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 LSM8O95777 96 aaKnown RBP19.31■□□□□ 0.68
HOXC6-202ENST00000394331 ELK3P41970 407 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 GRM1Q13255 1194 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 TRPC3Q13507 836 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms