RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 ARNTL2Q8WYA1 636 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 I6L893 689 aaPredicted RBP20.1■□□□□ 0.81
RCCD1-201ENST00000394258 DAB1O75553 588 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 STK10O94804 968 aaKnown RBP20.1■□□□□ 0.81
RCCD1-201ENST00000394258 YY1P25490 414 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 FDFT1P37268 417 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 ALDH18A1P54886 795 aaKnown RBP20.1■□□□□ 0.81
RCCD1-201ENST00000394258 RCN1Q15293 331 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 ATG16L1Q676U5 607 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 GPRIN1Q7Z2K8 1008 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 PPP1R14CQ8TAE6 165 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 LPPQ93052 612 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 CRTAC1Q9NQ79 661 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 TMEM30AQ9NV96 361 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 STAP1Q9ULZ2 295 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 SNX10Q9Y5X0 201 aa20.1■□□□□ 0.81
RCCD1-201ENST00000394258 TPP1O14773 563 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 ALDOAP04075 364 aaKnown RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 FYNP06241 537 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 USP17L7P0C7H9 530 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 WARSP23381 471 aaKnown RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 CRHR1P34998 444 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 CACNA2D1P54289 1103 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 KDSRQ06136 332 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 XKR4Q5GH76 650 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 PPM1JQ5JR12 505 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 WNT8BQ93098 351 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 RHOBTB2Q9BYZ6 727 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 LRRC42Q9Y546 428 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 MYBPHLA2RUH7 354 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 HACD1B0YJ81 288 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 B2RBV5 119 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 ITM2AO43736 263 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 BPGMP07738 259 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 ZNF865P0CJ78 1059 aaPredicted RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 KCNA4P22459 653 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 RPL10AP62906 217 aaKnown RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 PDE1BQ01064 536 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 IFRD2Q12894 506 aaPredicted RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 PDK1Q15118 436 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 TOP6BLQ8N6T0 577 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 OR52K1Q8NGK4 314 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 EDEM1Q92611 657 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 CLPTM1LQ96KA5 538 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 SENP8Q96LD8 212 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 GAD1Q99259 594 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 XPNPEP3Q9NQH7 507 aa20.09■□□□□ 0.81
RCCD1-201ENST00000394258 KLHL8Q9P2G9 620 aaPredicted RBP20.09■□□□□ 0.81
RCCD1-201ENST00000394258 TOMM70O94826 608 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 NCAM1P13591 858 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 SERPINB9P50453 376 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 CRYBB1P53674 252 aaPredicted RBP20.08■□□□□ 0.81
RCCD1-201ENST00000394258 PCBP1Q15365 356 aaKnown RBP eCLIP20.08■□□□□ 0.81
RCCD1-201ENST00000394258 SPRYD7Q5W111 196 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 PACS1Q6VY07 963 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 LIMS2Q7Z4I7 341 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 TEX9Q8N6V9 391 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 FBXO41Q8TF61 875 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 NRG4Q8WWG1 115 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 C7orf26Q96N11 449 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 TSPYL2Q9H2G4 693 aaPredicted RBP20.08■□□□□ 0.81
RCCD1-201ENST00000394258 DCLRE1BQ9H816 532 aa20.08■□□□□ 0.81
RCCD1-201ENST00000394258 C17orf102A2RUQ5 167 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 A6NHS1 94 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 HNRNPCL1O60812 293 aaKnown RBP20.08■□□□□ 0.8
RCCD1-201ENST00000394258 OPHN1O60890 802 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 CTSHP09668 335 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 FAM200BP0CF97 657 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 ERCC2P18074 760 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 UBAP2LQ14157 1087 aaKnown RBP20.08■□□□□ 0.8
RCCD1-201ENST00000394258 KRT72Q14CN4 511 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 FASTKD1Q53R41 847 aaKnown RBP20.08■□□□□ 0.8
RCCD1-201ENST00000394258 N4BP2L1Q5TBK1 243 aaPredicted RBP20.08■□□□□ 0.8
RCCD1-201ENST00000394258 ANO7Q6IWH7 933 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 ATG14Q6ZNE5 492 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 NT5C3BQ969T7 300 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 RILPQ96NA2 401 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 DNAI2Q9GZS0 605 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.08■□□□□ 0.85e-6■■■■□ 22.9
RCCD1-201ENST00000394258 KCNK4Q9NYG8 393 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 RPS6KL1Q9Y6S9 549 aa20.08■□□□□ 0.8
RCCD1-201ENST00000394258 CAPN14A8MX76 684 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 SMIM24O75264 130 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 GSRP00390 522 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 IL1BP01584 269 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 ADRA1BP35368 520 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 ABCG1P45844 678 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 STX3Q13277 289 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 PDE1CQ14123 709 aaPredicted RBP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 CRLF3Q8IUI8 442 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 SHKBP1Q8TBC3 707 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 CDKL2Q92772 493 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 APOL2Q9BQE5 337 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 EMCNQ9ULC0 261 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 IQCA1LA6NCM1 817 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms