RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SLC25A52Q3SY17 297 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 RABGAP1LQ5R372 815 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 ARMCX6Q7L4S7 300 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 ZNF366Q8N895 744 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 PRDM16Q9HAZ2 1276 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 CBX8Q9HC52 389 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 METTL5Q9NRN9 209 aaKnown RBP31.77■■■□□ 2.68
CMTM4-202ENST00000394106 TMEM59LQ9UK28 342 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 HS3ST4Q9Y661 456 aa31.77■■■□□ 2.68
CMTM4-202ENST00000394106 PRR5-ARHGAP8B1AHC4 643 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 ZNF217O75362 1048 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 PAGE1O75459 146 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 GGCXP38435 758 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 CSKP41240 450 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 ARHGAP8P85298 464 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 MTA1Q13330 715 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 AUHQ13825 339 aaKnown RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 TRNP1Q6NT89 227 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 FBXL22Q6P050 247 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 CYP2U1Q7Z449 544 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 NT5C3BQ969T7 300 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 NAP1L5Q96NT1 182 aaPredicted RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 RPRD1AQ96P16 312 aaPredicted RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 MKRN2Q9H000 416 aaKnown RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 TKTL2Q9H0I9 626 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 SIK2Q9H0K1 926 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 WDCPQ9H6R7 721 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 CD93Q9NPY3 652 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 KIAA1522Q9P206 1035 aaPredicted RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 INTS6Q9UL03 887 aaKnown RBP31.76■■■□□ 2.67
CMTM4-202ENST00000394106 VANGL2Q9ULK5 521 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 CKAP5Q14008 2032 aa31.76■■■□□ 2.67
CMTM4-202ENST00000394106 BCLAF3A2AJT9 711 aaKnown RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 ADCY5O95622 1261 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 F9P00740 461 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 SERPINC1P01008 464 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 ZNF806P0C7X5 589 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 NSFP46459 744 aaKnown RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CXCR3P49682 368 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 RPL6Q02878 288 aaKnown RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CENPCQ03188 943 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CLEC16AQ2KHT3 1053 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 PITRM1Q5JRX3 1037 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 PLA2G2CQ5R387 149 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 LUZP1Q86V48 1076 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CACUL1Q86Y37 369 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CCAR2Q8N163 923 aaKnown RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 C12orf50Q8NA57 414 aaPredicted RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 PGAP3Q96FM1 320 aaPredicted RBP31.75■■■□□ 2.67
CMTM4-202ENST00000394106 CFAP57Q96MR6 1250 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 AGPAT1Q99943 283 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 TMEM245Q9H330 911 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 VPS45Q9NRW7 570 aa31.75■■■□□ 2.67
CMTM4-202ENST00000394106 IGHV1OR15-9A0A0B4J2B8 117 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 CAVIN2O95810 425 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 UNGP13051 313 aaPredicted RBP31.74■■■□□ 2.67
CMTM4-202ENST00000394106 FERP16591 822 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 TPM4P67936 248 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 BRMS1LQ5PSV4 323 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 TTC39BQ5VTQ0 682 aaPredicted RBP31.74■■■□□ 2.67
CMTM4-202ENST00000394106 SLC36A4Q6YBV0 504 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 TMPRSS6Q8IU80 811 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 DEFB119Q8N690 84 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 EMC1Q8N766 993 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 IGSF8Q969P0 613 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 TTC17Q96AE7 1141 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 ARHGEF38Q9NXL2 777 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 CDV3Q9UKY7 258 aaKnown RBP31.74■■■□□ 2.67
CMTM4-202ENST00000394106 PAXBP1Q9Y5B6 917 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 SPTBN4Q9H254 2564 aa31.74■■■□□ 2.67
CMTM4-202ENST00000394106 NUP205Q92621 2012 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 A0A1B0GTH6 734 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP31.73■■■□□ 2.67
CMTM4-202ENST00000394106 FOXD2O60548 495 aaPredicted RBP31.73■■■□□ 2.67
CMTM4-202ENST00000394106 MOCS3O95396 460 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 CCDC172P0C7W6 258 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 ATXN1P54253 815 aaKnown RBP31.73■■■□□ 2.67
CMTM4-202ENST00000394106 AASDHQ4L235 1098 aaPredicted RBP31.73■■■□□ 2.67
CMTM4-202ENST00000394106 PRCCQ92733 491 aaPredicted RBP31.73■■■□□ 2.67
CMTM4-202ENST00000394106 SIPA1Q96FS4 1042 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 ANLNQ9NQW6 1124 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 ADAM22Q9P0K1 906 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 DMXL1Q9Y485 3027 aa31.73■■■□□ 2.67
CMTM4-202ENST00000394106 A0A1B0GVM2 712 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 TCAF2A6NFQ2 919 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 AP5Z1O43299 807 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 ASLP04424 464 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 PTGER3P43115 390 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 NUMBP49757 651 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 IRAK1P51617 712 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 COPAP53621 1224 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 ST8SIA6P61647 398 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 TCEAL6Q6IPX3 200 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 C14orf80Q86SX3 495 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 APCDD1Q8J025 514 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 BAP1Q92560 729 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 PIGKQ92643 395 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 TCEAL3Q969E4 200 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 SNX10Q9Y5X0 201 aa31.72■■■□□ 2.67
CMTM4-202ENST00000394106 CEP192Q8TEP8 1941 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms