RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ZNF781Q8N8C0 355 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 RXFP2Q8WXD0 754 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 C8orf37Q96NL8 207 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 FAF1Q9UNN5 650 aaPredicted RBP23.31■■□□□ 1.32
RARA-202ENST00000394081 KIAA1217Q5T5P2 1943 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 MDM4O15151 490 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 CBFA2T3O75081 653 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 TNNC2P02585 160 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 EFNA5P52803 228 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 PTPN11Q06124 597 aaPredicted RBP23.31■■□□□ 1.32
RARA-202ENST00000394081 CBX3Q13185 183 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 LPCAT2Q7L5N7 544 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 HACE1Q8IYU2 909 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 EIF2B3Q9NR50 452 aaKnown RBP23.31■■□□□ 1.32
RARA-202ENST00000394081 VPS45Q9NRW7 570 aa23.31■■□□□ 1.32
RARA-202ENST00000394081 CPSF3Q9UKF6 684 aaKnown RBP23.31■■□□□ 1.32
RARA-202ENST00000394081 PAIP2BQ9ULR5 123 aaKnown RBP23.31■■□□□ 1.32
RARA-202ENST00000394081 TMEM221A6NGB7 291 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MICAL2O94851 1124 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 C8BP07358 591 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 ADORA2AP29274 412 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 GP5P40197 560 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 GPD2P43304 727 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 PRKG1Q13976 671 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 GRTP1Q5TC63 336 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 ZNF772Q68DY9 489 aaPredicted RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 LRRC8BQ6P9F7 803 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 CARM1Q86X55 608 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 TOP1MTQ969P6 601 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MRPL4Q9BYD3 311 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 OSBPL6Q9BZF3 934 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MRPL40Q9NQ50 206 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 RRN3Q9NYV6 651 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 IGSF9Q9P2J2 1179 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 EPS15L1Q9UBC2 864 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MID2Q9UJV3 735 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MAFBQ9Y5Q3 323 aaPredicted RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 SSC5DA1L4H1 1573 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 WDR27A2RRH5 827 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 ACOT8O14734 319 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 OATP04181 439 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 PPARGP37231 505 aaPredicted RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 PDAP1Q13442 181 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 CEACAM7Q14002 265 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 PATL1Q86TB9 770 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 TDRD5Q8NAT2 981 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 QKIQ96PU8 341 aaKnown RBP eCLIP23.3■■□□□ 1.32
RARA-202ENST00000394081 CPNE1Q99829 537 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 NIFKQ9BYG3 293 aaKnown RBP23.3■■□□□ 1.32
RARA-202ENST00000394081 RNPEPQ9H4A4 650 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 ZNF385DQ9H6B1 395 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 PNPLA3Q9NST1 481 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 MYRFQ9Y2G1 1151 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 WDR37Q9Y2I8 494 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 CNTNAP1P78357 1384 aa23.3■■□□□ 1.32
RARA-202ENST00000394081 COL11A2P13942 1736 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 H3BNH8 94 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 MATN2O00339 956 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 BMP10O95393 424 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 HOXC6P09630 235 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 SERPINB5P36952 375 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 SH3PXD2AQ5TCZ1 1133 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 FKBP1CQ5VVH2 108 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 MAPK15Q8TD08 544 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 ANKRD36BP1Q96IX9 119 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 VPS50Q96JG6 964 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 ILKAPQ9H0C8 392 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 PRDM16Q9HAZ2 1276 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 MAN1C1Q9NR34 630 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 MTMR10Q9NXD2 777 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 TUBA8Q9NY65 449 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 TXNDC16Q9P2K2 825 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 ZNF70Q9UC06 446 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 RNF11Q9Y3C5 154 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 SPDYE16A6NNV3 312 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 HDAC3O15379 428 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 B4GALT4O60513 344 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 TRPA1O75762 1119 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 PRKAA2P54646 552 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 PHEXP78562 749 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 RSBN1LQ6PCB5 846 aaPredicted RBP23.29■■□□□ 1.32
RARA-202ENST00000394081 CDAN1Q8IWY9 1227 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 GALNT4Q8N4A0 578 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 CNTD1Q8N815 330 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 OR52B2Q96RD2 323 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 ZNF341Q9BYN7 854 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 WDR41Q9HAD4 459 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 EFCAB1Q9HAE3 211 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 HACD3Q9P035 362 aa23.29■■□□□ 1.32
RARA-202ENST00000394081 TRIM13O60858 407 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 TFAMQ00059 246 aaKnown RBP23.28■■□□□ 1.32
RARA-202ENST00000394081 MS4A2Q01362 244 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 PPP2R5DQ14738 602 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 MGAT5BQ3V5L5 792 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 SLC44A4Q53GD3 710 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 ZNF667Q5HYK9 610 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 TRNP1Q6NT89 227 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 RWDD4Q6NW29 188 aaKnown RBP23.28■■□□□ 1.32
RARA-202ENST00000394081 PAOXQ6QHF9 649 aa23.28■■□□□ 1.32
RARA-202ENST00000394081 SLC7A14Q8TBB6 771 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms