RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 DQX1Q8TE96 717 aaKnown RBP26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 MYLK2Q9H1R3 596 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 NPHS2Q9NP85 383 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 ZNF189O75820 626 aaPredicted RBP26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 PGAM1P18669 254 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 PAX3P23760 479 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 SERPINB4P48594 390 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 TBC1D1Q86TI0 1168 aaPredicted RBP26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 GORASP1Q9BQQ3 440 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 SYBUQ9NX95 663 aa26.29■■□□□ 1.8
SMARCD3-203ENST00000392811 NLRC5Q86WI3 1866 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 THSD7BQ9C0I4 1608 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 LRIG2O94898 1065 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 EPHB2P29323 1055 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 ALDH3A1P30838 453 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 ELF3P78545 371 aaPredicted RBP26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 SETDB1Q15047 1291 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 CCNJLQ8IV13 435 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 MKS1Q9NXB0 559 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 PLLPQ9Y342 182 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 PTPRDP23468 1912 aa26.28■■□□□ 1.8
SMARCD3-203ENST00000392811 ALDH1A1P00352 501 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 BGNP21810 368 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 ZNF135P52742 658 aaPredicted RBP26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 TSPY1Q01534 308 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 NIPAL4Q0D2K0 466 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 GALNT2Q10471 571 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 OVGP1Q12889 678 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 CRYMQ14894 314 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 MAPRE1Q15691 268 aaKnown RBP26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 MARK2Q7KZI7 788 aaKnown RBP26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 RNF34Q969K3 372 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 HDAC11Q96DB2 347 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 ERP27Q96DN0 273 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 TSSK1BQ9BXA7 367 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 SLC13A1Q9BZW2 595 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 SLC17A6Q9P2U8 582 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 TROVE2P10155 538 aaKnown RBP eCLIP26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 OLIG2Q13516 323 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 AGAP3Q96P47 875 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 LRRC37BQ96QE4 947 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 BRD8Q9H0E9 1235 aa26.27■■□□□ 1.8
SMARCD3-203ENST00000392811 INPPL1O15357 1258 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 B4GALT3O60512 393 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 DCTN3O75935 186 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 NEFHP12036 1026 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 TYMPP19971 482 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 MX2P20592 715 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 ACLYP53396 1101 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 KCNJ2P63252 427 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 PLEKHG4Q58EX7 1191 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 PARP9Q8IXQ6 854 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 NAT9Q9BTE0 207 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 PCMTD2Q9NV79 361 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 SQORQ9Y6N5 450 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 PATJQ8NI35 1801 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 ZBTB24O43167 697 aaPredicted RBP26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 IGLV3-25P01717 112 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 GARSP41250 739 aaKnown RBP26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 RTN4RL1Q86UN2 441 aaPredicted RBP26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 OR52K1Q8NGK4 314 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 RFWD2Q8NHY2 731 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 KLHL29Q96CT2 875 aa26.26■■□□□ 1.79
SMARCD3-203ENST00000392811 AP2A1O95782 977 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 CCNB1P14635 433 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 NQO1P15559 274 aaKnown RBP26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 CNTFP26441 200 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 SERPINB6P35237 376 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 ZBTB17Q13105 803 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 TIFABQ6ZNK6 161 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 BEND5Q7L4P6 421 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 SPATA2LQ8IUW3 424 aaPredicted RBP26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 NDUFAF2Q8N183 169 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 ZNF398Q8TD17 642 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 TRIM62Q9BVG3 475 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 PCDHB8Q9UN66 801 aa26.25■■□□□ 1.79
SMARCD3-203ENST00000392811 ARHGEF37A1IGU5 675 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 C2CD2LO14523 706 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 MTSS1O43312 755 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 MGRN1O60291 552 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 USP12O75317 370 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 CD68P34810 354 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 YWHAHQ04917 246 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 NLRP9Q7RTR0 991 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 RNF180Q86T96 592 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 ZNF280BQ86YH2 543 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 CDKL2Q92772 493 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 RGS18Q9NS28 235 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 KANSL3Q9P2N6 904 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 DCTN4Q9UJW0 460 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 TRIM33Q9UPN9 1127 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 CABYRO75952 493 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 CKBP12277 381 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 SKIV2L2P42285 1042 aaKnown RBP26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 SLC5A3P53794 718 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 EIF4EBP2Q13542 120 aaPredicted RBP26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 PACS1Q6VY07 963 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 ASRGL1Q7L266 308 aa26.24■■□□□ 1.79
SMARCD3-203ENST00000392811 KIF2BQ8N4N8 673 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms