RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TRIM60Q495X7 471 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 NADK2Q4G0N4 442 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 TMC5Q6UXY8 1006 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 PLEKHA5Q9HAU0 1116 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 NMRAL1Q9HBL8 299 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 TRNAU1APQ9NX07 287 aaKnown RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 POMPQ9Y244 141 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 PTGES3LE9PB15 166 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 CBFA2T3O75081 653 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 GNAZP19086 355 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 KLRC2P26717 231 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 PPARGP37231 505 aaPredicted RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 PLK1P53350 603 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 NRLP54845 237 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.57□□□□□ -0.08
RTF1-201ENST00000389629 PPHLN1Q8NEY8 458 aaKnown RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 NCKIPSDQ9NZQ3 722 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 ACOT9Q9Y305 439 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 RGSL1A5PLK6 1076 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 MYO1GB0I1T2 1018 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 M0QZ92 97 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 KCNK1O00180 336 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 LAMTOR4Q0VGL1 99 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 PTPN20Q4JDL3 420 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 ANGPTL8Q6UXH0 198 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 RNF157Q96PX1 679 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 CIB1Q99828 191 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 DPP3Q9NY33 737 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 ADGRA2Q96PE1 1338 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 LRCH4O75427 683 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 CDH3P22223 829 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 KCNK10P57789 538 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 RBBP7Q16576 425 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 ZC3H12AQ5D1E8 599 aaKnown RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 TXNRD3NBQ6F5E7 133 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 CMC1Q7Z7K0 106 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 HTR3CQ8WXA8 447 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 DLG3Q92796 817 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 LRRC39Q96DD0 335 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 PRMT7Q9NVM4 692 aaPredicted RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.57□□□□□ -0.08
RTF1-201ENST00000389629 MYH3P11055 1940 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 CICQ96RK0 1608 aaPredicted RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 CSHL1Q14406 222 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 CCDC153Q494R4 210 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 ANGEL2Q5VTE6 544 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 SH3BP5LQ7L8J4 393 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 DHRSXQ8N5I4 330 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 HSPBAP1Q96EW2 488 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 SSU72Q9NP77 194 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 COQ4Q9Y3A0 265 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 MAGEB2O15479 319 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 TMEM63AO94886 807 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 C4BPAP04003 597 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 DGKZQ13574 1117 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 C7orf26Q96N11 449 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 IQCA1LA6NCM1 817 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 LYPLA2O95372 231 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 CST3P01034 146 aaPredicted RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 PIK3R1P27986 724 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 TMEM62Q0P6H9 643 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 KLF10Q13118 480 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 MTX3Q5HYI7 312 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 NETO2Q8NC67 525 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 P2RX7Q99572 595 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 MIPEPQ99797 713 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 PORCNQ9H237 461 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 COG4Q9H9E3 785 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 APOBEC3GQ9HC16 384 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 RPL14P50914 215 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 CCDC85BQ15834 202 aaPredicted RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 TAF12Q16514 161 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 AASDHQ4L235 1098 aaPredicted RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 KLHDC10Q6PID8 442 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 RHBDF2Q6PJF5 856 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 BNIPLQ7Z465 357 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 FAM156AQ8NDB6 213 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 MAGEE2Q8TD90 523 aaPredicted RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 ZFYVE19Q96K21 471 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 NPAS2Q99743 824 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 EBNA1BP2Q99848 306 aaKnown RBP14.56□□□□□ -0.08
RTF1-201ENST00000389629 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
RTF1-201ENST00000389629 CNTNAP2Q9UHC6 1331 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 M0QYT0 321 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 PMPCBO75439 489 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 MYL4P12829 197 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ATP6V1B2P21281 511 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 PTPN7P35236 360 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 TGFB2P61812 414 aa14.55□□□□□ -0.08
RTF1-201ENST00000389629 ZIK1Q3SY52 487 aaPredicted RBP14.55□□□□□ -0.08
RTF1-201ENST00000389629 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms