RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PPP2CAP67775 309 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 DLG4P78352 724 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 PDE4CQ08493 712 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 ZNF211Q13398 564 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 NAPEPLDQ6IQ20 393 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 RFWD3Q6PCD5 774 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 INO80CQ6PI98 192 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 EPM2AIP1Q7L775 607 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 KIAA0907Q7Z7F0 614 aaPredicted RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 MFN1Q8IWA4 741 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 FAM217AQ8IXS0 508 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 STK40Q8N2I9 435 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 AADATQ8N5Z0 425 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.03□□□□□ -0.8
IFT88-203ENST00000389373 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 EDEM1Q92611 657 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 ARHGAP9Q9BRR9 750 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
IFT88-203ENST00000389373 FZD4Q9ULV1 537 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 SATB2Q9UPW6 733 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 CA5BQ9Y2D0 317 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 CEP83Q9Y592 693 aa10.03□□□□□ -0.8
IFT88-203ENST00000389373 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 DXOO77932 396 aaKnown RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 HLA-DRAP01903 254 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 RPN1P04843 607 aaKnown RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 C7P10643 843 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 CSKP41240 450 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 NUMBP49757 651 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 TKTL1P51854 596 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 ADPRHP54922 357 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 AMPD3Q01432 767 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 HNRNPA1L2Q32P51 320 aaKnown RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 ADGRF1Q5T601 910 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 C9orf64Q5T6V5 341 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 CDCP2Q5VXM1 449 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 FAM173BQ6P4H8 233 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 SLC25A45Q8N413 288 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 EXD3Q8N9H8 876 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 OR4C6Q8NH72 309 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 TAF4BQ92750 862 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 DHX58Q96C10 678 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 KLHDC7BQ96G42 594 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 MYO19Q96H55 970 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 MYOCQ99972 504 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 DNAI2Q9GZS0 605 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 ASCL3Q9NQ33 180 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 OLA1Q9NTK5 396 aaKnown RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 UCKL1Q9NWZ5 548 aa10.02□□□□□ -0.81
IFT88-203ENST00000389373 TFIP11Q9UBB9 837 aaKnown RBP10.02□□□□□ -0.81
IFT88-203ENST00000389373 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 TARSL2A2RTX5 802 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 MSI1O43347 362 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 ZBED1O96006 694 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 ASLP04424 464 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 NTRK1P04629 796 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 SLFN14P0C7P3 912 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 ALPPL2P10696 532 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 C5AR1P21730 350 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 DGKAP23743 735 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 CASP1P29466 404 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 CTSOP43234 321 aaPredicted RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 ZNF445P59923 1031 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 KNOP1Q1ED39 458 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 RNF219Q5W0B1 726 aaPredicted RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 ATG14Q6ZNE5 492 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 MMS22LQ6ZRQ5 1243 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 PIGZQ86VD9 579 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 CCDC117Q8IWD4 279 aaPredicted RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 MAPK15Q8TD08 544 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 SNRNP27Q8WVK2 155 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 KLK6Q92876 244 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 TTC17Q96AE7 1141 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 RPL10LQ96L21 214 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 MRGPRX3Q96LB0 322 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 FAM129BQ96TA1 746 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 ULBP1Q9BZM6 244 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 IMPG2Q9BZV3 1241 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 MMRN2Q9H8L6 949 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 ERVW-1Q9UQF0 538 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 HBS1LQ9Y450 684 aaKnown RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 UBE4BO95155 1302 aa10.01□□□□□ -0.81
IFT88-203ENST00000389373 TP53BP1Q12888 1972 aaPredicted RBP10.01□□□□□ -0.81
IFT88-203ENST00000389373 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
IFT88-203ENST00000389373 EDDM13A0A1B0GTR0 161 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CPED1A4D0V7 1026 aa10□□□□□ -0.81
IFT88-203ENST00000389373 RTN2O75298 545 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ADH1BP00325 375 aa10□□□□□ -0.81
IFT88-203ENST00000389373 ASS1P00966 412 aaKnown RBP10□□□□□ -0.81
IFT88-203ENST00000389373 THEGLP0DJG4 465 aa10□□□□□ -0.81
IFT88-203ENST00000389373 CKMT1AP12532 417 aa10□□□□□ -0.81
IFT88-203ENST00000389373 DUSP3P51452 185 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms