RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PCOLCE2Q9UKZ9 415 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 INTS6Q9UL03 887 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 TP53BP1Q12888 1972 aaPredicted RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 DSPP15924 2871 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 ZFYVE26Q68DK2 2539 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 TYW5A2RUC4 315 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 MOCS2O96007 188 aaPredicted RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 CSKP41240 450 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 FSCBQ5H9T9 825 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 SYPL2Q5VXT5 272 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 ZNF776Q68DI1 518 aaPredicted RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 MMS22LQ6ZRQ5 1243 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 CFAP52Q8N1V2 620 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 CARNMT1Q8N4J0 409 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 PNPLA1Q8N8W4 532 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 SETD7Q8WTS6 366 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 BIRC7Q96CA5 298 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 SRRTQ9BXP5 876 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 RSPH9Q9H1X1 276 aaPredicted RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 CYTH4Q9UIA0 394 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 XPO7Q9UIA9 1087 aaKnown RBP17.48■□□□□ 0.39
SMN2-201ENST00000380741 PLXNA2O75051 1894 aa17.48■□□□□ 0.39
SMN2-201ENST00000380741 CELSR3Q9NYQ7 3312 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 SRRM3A6NNA2 597 aaPredicted RBP17.47■□□□□ 0.39
SMN2-201ENST00000380741 PAPSS1O43252 624 aaPredicted RBP17.47■□□□□ 0.39
SMN2-201ENST00000380741 SIN3BO75182 1162 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 ACADSBP45954 432 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 ST8SIA6P61647 398 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 CDH18Q13634 790 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 KIF19Q2TAC6 998 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 HNRNPA1L2Q32P51 320 aaKnown RBP17.47■□□□□ 0.39
SMN2-201ENST00000380741 DCAF6Q58WW2 860 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 BEND5Q7L4P6 421 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 ADAMTS14Q8WXS8 1223 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 MRGPRX3Q96LB0 322 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 SLC4A5Q9BY07 1137 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 SGK2Q9HBY8 427 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 TM9SF3Q9HD45 589 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 UBE2TQ9NPD8 197 aaPredicted RBP17.47■□□□□ 0.39
SMN2-201ENST00000380741 ACP6Q9NPH0 428 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 PTPRBP23467 1997 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 ANKRD11Q6UB99 2663 aaPredicted RBP17.47■□□□□ 0.39
SMN2-201ENST00000380741 PLXNB3Q9ULL4 1909 aa17.47■□□□□ 0.39
SMN2-201ENST00000380741 E5RJQ4 531 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 CAPN9O14815 690 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 FSBPO95073 299 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 ASLP04424 464 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 MEA1Q16626 185 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 ZC3H12AQ5D1E8 599 aaKnown RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 PITRM1Q5JRX3 1037 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 LAYNQ6UX15 382 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 GLRX5Q86SX6 157 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 BAHD1Q8TBE0 780 aaPredicted RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 STK32AQ8WU08 396 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 ZNF606Q8WXB4 792 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 TRIM62Q9BVG3 475 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
SMN2-201ENST00000380741 OSGEPQ9NPF4 335 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 SNX11Q9Y5W9 270 aa17.46■□□□□ 0.39
SMN2-201ENST00000380741 THAP12O43422 761 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 MED7O43513 233 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 IGLV3-25P01717 112 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 APOEP02649 317 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 CD27P26842 260 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 GNA15P30679 374 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 CTSOP43234 321 aaPredicted RBP17.45■□□□□ 0.38
SMN2-201ENST00000380741 GRIA4P48058 902 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 TEAD4Q15561 434 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 RAP1GAP2Q684P5 730 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 GJB7Q6PEY0 223 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 DBX2Q6ZNG2 339 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 USP30Q70CQ3 517 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 SLCO6A1Q86UG4 719 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 CCDC117Q8IWD4 279 aaPredicted RBP17.45■□□□□ 0.38
SMN2-201ENST00000380741 LGI2Q8N0V4 545 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 ORAI3Q9BRQ5 295 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 CRACR2AQ9BSW2 395 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 FBXL12Q9NXK8 326 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 SERGEFQ9UGK8 458 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 SCML1Q9UN30 329 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 ERVW-1Q9UQF0 538 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 APOBEC2Q9Y235 224 aaKnown RBP17.45■□□□□ 0.38
SMN2-201ENST00000380741 ANKRD6Q9Y2G4 727 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 PCDHGB2Q9Y5G2 931 aa17.45■□□□□ 0.38
SMN2-201ENST00000380741 TTC34A8MYJ7 566 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 FLRT2O43155 660 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 TRUB2O95900 331 aaKnown RBP17.44■□□□□ 0.38
SMN2-201ENST00000380741 IGHV4-34P06331 123 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 TACR2P21452 398 aa17.44■□□□□ 0.38
SMN2-201ENST00000380741 YWHAZP63104 245 aaKnown RBP17.44■□□□□ 0.38
SMN2-201ENST00000380741 PITX1P78337 314 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms