RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SETD4Q9NVD3 440 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 PNPOQ9NVS9 261 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 GDAP2Q9NXN4 497 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.75■□□□□ 0.27
VPS16-203ENST00000380469 IGSF9Q9P2J2 1179 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 COPG2Q9UBF2 871 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 RALGAPA2Q2PPJ7 1873 aa16.75■□□□□ 0.27
VPS16-203ENST00000380469 MYO18AQ92614 2054 aaKnown RBP16.75■□□□□ 0.27
VPS16-203ENST00000380469 A0A088AWK7 358 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 MAGEA13PA6NCF6 341 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 SIN3BO75182 1162 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 DAB1O75553 588 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 CAPN15O75808 1086 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 UPP2O95045 317 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 SP100P23497 879 aaPredicted RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 AKAP5P24588 427 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 NOS2P35228 1153 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 MLH1P40692 756 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 PEX19P40855 299 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 IDH3AP50213 366 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 TUBP50607 506 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 COPAP53621 1224 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 ABCE1P61221 599 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 TMCO4Q5TGY1 634 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 DPY19L2Q6NUT2 758 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 PIGZQ86VD9 579 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 NDRG1Q92597 394 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 CERS2Q96G23 380 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 TMEM216Q9P0N5 145 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 ADAM28Q9UKQ2 775 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 EEF2KO00418 725 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 HUS1O60921 280 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 ZNF189O75820 626 aaPredicted RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 CPA3P15088 417 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 CDK7P50613 346 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 IRX1P78414 480 aaPredicted RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 SLC25A3Q00325 362 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 PAFAH1B3Q15102 231 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 SMAD1Q15797 465 aaKnown RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 ZNF618Q5T7W0 954 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 CES3Q6UWW8 571 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 PDZD4Q76G19 769 aaPredicted RBP16.74■□□□□ 0.27
VPS16-203ENST00000380469 CMTM5Q96DZ9 223 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 LRRC40Q9H9A6 602 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 STAP1Q9ULZ2 295 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 UTRNP46939 3433 aa16.74■□□□□ 0.27
VPS16-203ENST00000380469 M0QYT0 321 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SPTLC1O15269 473 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SPRP35270 261 aaPredicted RBP16.73■□□□□ 0.27
VPS16-203ENST00000380469 TAF6P49848 677 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 ERFP50548 548 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 DSG1Q02413 1049 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 DGKDQ16760 1214 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 AAGABQ6PD74 315 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SORT1Q99523 831 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 DUSP16Q9BY84 665 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SNX15Q9NRS6 342 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 IL1RAPL1Q9NZN1 696 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 KLHL8Q9P2G9 620 aaPredicted RBP16.73■□□□□ 0.27
VPS16-203ENST00000380469 SMIM28A0A1B0GU29 152 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 GPR32O75388 356 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 MMP3P08254 477 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 HARS2P49590 506 aaKnown RBP16.73■□□□□ 0.27
VPS16-203ENST00000380469 SERPINB8P50452 374 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 NME3Q13232 169 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.27
VPS16-203ENST00000380469 GSTA3Q16772 222 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SV2CQ496J9 727 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 PDPK2PQ6A1A2 396 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 RSPH3Q86UC2 560 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 KBTBD2Q8IY47 623 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SLC25A41Q8N5S1 370 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 POU5F2Q8N7G0 328 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SREK1Q8WXA9 508 aaKnown RBP16.73■□□□□ 0.27
VPS16-203ENST00000380469 OSMRQ99650 979 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 PPP1R12CQ9BZL4 782 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 CDHR5Q9HBB8 845 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 TMPRSS4Q9NRS4 437 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 KLK14Q9P0G3 267 aa16.73■□□□□ 0.27
VPS16-203ENST00000380469 SMIM24O75264 130 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 PRKCGP05129 697 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 ALOX15P16050 662 aaPredicted RBP16.72■□□□□ 0.27
VPS16-203ENST00000380469 NCF2P19878 526 aaPredicted RBP16.72■□□□□ 0.27
VPS16-203ENST00000380469 DEUP1Q05D60 604 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 ITGA9Q13797 1035 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 IZUMO2Q6UXV1 221 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 MAVSQ7Z434 540 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 DCLK2Q8N568 766 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 B3GALNT2Q8NCR0 500 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 GSTCDQ8NEC7 633 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 OR52K1Q8NGK4 314 aa16.72■□□□□ 0.27
VPS16-203ENST00000380469 GTF3C2Q8WUA4 911 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms