RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 AMHP03971 560 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 SERPINA6P08185 405 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 SLC34A1Q06495 639 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 DPYSQ14117 519 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 STXBP5Q5T5C0 1151 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 LDLRAD1Q5T700 205 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 LRRC74BQ6ZQY2 392 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 MAVSQ7Z434 540 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 GPR142Q7Z601 462 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 DNAJB3Q8WWF6 145 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 NT5C3BQ969T7 300 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 DUSP16Q9BY84 665 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 DOCK3Q8IZD9 2030 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 FAM72CH0Y354 149 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 PROCP04070 461 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 SLC1A6P48664 564 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 ERFP50548 548 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 GTF2A2P52657 109 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 FAM72AQ5TYM5 149 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 FAM72DQ6L9T8 149 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 FAM72BQ86X60 149 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 C10orf107Q8IVU9 208 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 ARHGAP24Q8N264 748 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 CFAP61Q8NHU2 1237 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 SHKBP1Q8TBC3 707 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 GTF3C2Q8WUA4 911 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 STMN2Q93045 179 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 FCRL3Q96P31 734 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 ANLNQ9NQW6 1124 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 TMEM216Q9P0N5 145 aa20.03■□□□□ 0.8
SHROOM1-202ENST00000378676 BTBD19C9JJ37 291 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 KCNK1O00180 336 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 DCLK1O15075 740 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 HUS1O60921 280 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 EPHX2P34913 555 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 NOS2P35228 1153 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PAFAH1B3Q15102 231 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PDK1Q15118 436 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 DBN1Q16643 649 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SV2CQ496J9 727 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PSTKQ8IV42 348 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SCUBE1Q8IWY4 988 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PIWIL2Q8TC59 973 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 ZC3H15Q8WU90 426 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 LENG1Q96BZ8 264 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PANX3Q96QZ0 392 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SORT1Q99523 831 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 HNRNPABQ99729 332 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 ZNF358Q9NW07 568 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 STX18Q9P2W9 335 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SF3B1O75533 1304 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 NRCAMQ92823 1304 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SMIM35A0A1B0GVV1 85 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 I6L893 689 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 EEF2KO00418 725 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 USP12O75317 370 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 UPP2O95045 317 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 KCNE1P15382 129 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 NPR3P17342 541 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 PNPLA4P41247 253 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 LILRA4P59901 499 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 GRIK3Q13003 919 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 SNX17Q15036 470 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 XKR4Q5GH76 650 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 RABGAP1LQ5R372 815 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 CMC1Q7Z7K0 106 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 ULK2Q8IYT8 1036 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 OR52K1Q8NGK4 314 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 ADAM32Q8TC27 787 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 CERS2Q96G23 380 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 TNIP3Q96KP6 325 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 TINF2Q9BSI4 451 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 THTPAQ9BU02 230 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 ZFATQ9P243 1243 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 CACNG4Q9UBN1 327 aa20.02■□□□□ 0.8
SHROOM1-202ENST00000378676 MBLAC1A4D2B0 266 aaPredicted RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 GLTPD2A6NH11 291 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 A6NHS1 94 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 NRP1O14786 923 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 STRNO43815 780 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 TM7SF2O76062 418 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 WARSP23381 471 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 PDE1BQ01064 536 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 DEUP1Q05D60 604 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 NAB1Q13506 487 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 KIAA0319Q5VV43 1072 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 RIPOR1Q6ZS17 1223 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 CLEC20AQ6ZU45 233 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 SCG3Q8WXD2 468 aaKnown RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 SLC10A4Q96EP9 437 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 SLC2A13Q96QE2 648 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 PNPOQ9NVS9 261 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 IGSF9Q9P2J2 1179 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 CORO1CQ9ULV4 474 aaPredicted RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 RPS6KL1Q9Y6S9 549 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 DYNC1LI2O43237 492 aaPredicted RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 F2P00734 622 aa20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
SHROOM1-202ENST00000378676 IFRD2Q12894 506 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms