RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 HFE2Q6ZVN8 426 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 FAM72BQ86X60 149 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 ARHGAP24Q8N264 748 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 B3GALNT2Q8NCR0 500 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CCNYQ8ND76 341 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 APPL2Q8NEU8 664 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 STMN2Q93045 179 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PGBD4Q96DM1 585 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 SEPT10Q9P0V9 454 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 KCNK1O00180 336 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CREB3O43889 395 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DAB1O75553 588 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CD4P01730 458 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 ACTR3P61158 418 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 WDR75Q8IWA0 830 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 OR6J1Q8NGC5 347 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PPP1R14CQ8TAE6 165 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CDKL2Q92772 493 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 HNRNPABQ99729 332 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PNPOQ9NVS9 261 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DCDC2Q9UHG0 476 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 A0A088AWK7 358 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 E2F8A0AVK6 867 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 MEI4A8MW99 385 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 M0QYT0 321 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DCLK1O15075 740 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 USP12O75317 370 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.614e-7■■■■■ 133.7
BEST1-201ENST00000378043 FYNP06241 537 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 ATP5BP06576 529 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 ACAT1P24752 427 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 NOS2P35228 1153 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 LILRA4P59901 499 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 PAFAH1B3Q15102 231 aaKnown RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 PDK1Q15118 436 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 TBCCQ15814 346 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CMC1Q7Z7K0 106 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 MYLK4Q86YV6 388 aaPredicted RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 LMNTD2Q8IXW0 634 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DOCK3Q8IZD9 2030 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 OR6Y1Q8NGX8 325 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 CERS2Q96G23 380 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 COPG2Q9UBF2 871 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 ZNF212Q9UDV6 495 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 RPS6KL1Q9Y6S9 549 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 NEBLO76041 1014 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 SERPINE1P05121 402 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 SMIM10L2AP0DMW4 78 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 SMIM10L2BP0DMW5 78 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 KCNE1P15382 129 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 TAF6P49848 677 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 RABGGTBP53611 331 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 CCNA1P78396 465 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
BEST1-201ENST00000378043 PDE1BQ01064 536 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 KLC1Q07866 573 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 NME3Q13232 169 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
BEST1-201ENST00000378043 NME8Q8N427 588 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 MAML3Q96JK9 1138 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 NAT9Q9BTE0 207 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
BEST1-201ENST00000378043 PIN4Q9Y237 131 aaKnown RBP11.21□□□□□ -0.61
BEST1-201ENST00000378043 MBLAC1A4D2B0 266 aaPredicted RBP11.21□□□□□ -0.62
BEST1-201ENST00000378043 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 NRP1O14786 923 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 SIN3BO75182 1162 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 STK10O94804 968 aaKnown RBP11.21□□□□□ -0.62
BEST1-201ENST00000378043 POLBP06746 335 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 TYK2P29597 1187 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 MAGEA12P43365 314 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 IDH3AP50213 366 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 SLC25A3Q00325 362 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 NAB1Q13506 487 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.62
BEST1-201ENST00000378043 DNAL1Q4LDG9 190 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 VWA5B1Q5TIE3 1220 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 PID1Q7Z2X4 250 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 RASSF3Q86WH2 238 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 ATP2A3Q93084 1043 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms