RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 KIAA0907Q7Z7F0 614 aaPredicted RBP13.67□□□□□ -0.22
CKAP2-202ENST00000378034 PSTKQ8IV42 348 aaKnown RBP13.67□□□□□ -0.22
CKAP2-202ENST00000378034 ZNF683Q8IZ20 524 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 CFAP52Q8N1V2 620 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 MYEOVQ96EZ4 313 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 STIM2Q9P246 746 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 OR12D3Q9UGF7 316 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 FZD10Q9ULW2 581 aa13.67□□□□□ -0.22
CKAP2-202ENST00000378034 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 E9PAM4 449 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 RNF40O75150 1001 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 MTA2O94776 668 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 CDH4P55283 916 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 MESP2Q0VG99 397 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 CDH18Q13634 790 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 C14orf80Q86SX3 495 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 TMEM139Q8IV31 216 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 CARNMT1Q8N4J0 409 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 PPP1R9BQ96SB3 815 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
CKAP2-202ENST00000378034 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 PCDHA13Q9Y5I0 950 aa13.66□□□□□ -0.22
CKAP2-202ENST00000378034 H0Y626 953 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 NPC1O15118 1278 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 TRIM24O15164 1050 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 PRPSAP2O60256 369 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 LRCH4O75427 683 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 MIPP30301 263 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 HLA-FP30511 346 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 L1CAMP32004 1257 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 HTR7P34969 479 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ARHGAP25P42331 645 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 DMC1Q14565 340 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 TRMT11Q7Z4G4 463 aaKnown RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 AHI1Q8N157 1196 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 CCAR2Q8N163 923 aaKnown RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ARFGAP1Q8N6T3 406 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 SLC35G2Q8TBE7 412 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 USP33Q8TEY7 942 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 UCMAQ8WVF2 138 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ACDQ96AP0 544 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 PABPC1P11940 636 aaKnown RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 MAN1A1P33908 653 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 KIR2DL1P43626 348 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 CCR3P51677 355 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ZNF135P52742 658 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 MTAPQ13126 283 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 BOLA3Q53S33 107 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 MANEALQ5VSG8 457 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 RAD9BQ6WBX8 426 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 C1orf210Q8IVY1 113 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 CCDC112Q8NEF3 446 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ANP32BQ92688 251 aaKnown RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 CALR3Q96L12 384 aaKnown RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 ABCB8Q9NUT2 735 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
CKAP2-202ENST00000378034 USP18Q9UMW8 372 aa13.65□□□□□ -0.22
CKAP2-202ENST00000378034 A0A0A6YYK5 440 aaPredicted RBP13.64□□□□□ -0.23
CKAP2-202ENST00000378034 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 SRGAP2O75044 1071 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 PROSCO94903 275 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
CKAP2-202ENST00000378034 MOCS3O95396 460 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 HNRNPLP14866 589 aaKnown RBP eCLIP13.64□□□□□ -0.23
CKAP2-202ENST00000378034 GGCXP38435 758 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 HADHBP55084 474 aaKnown RBP13.64□□□□□ -0.23
CKAP2-202ENST00000378034 KRT83P78385 493 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 GAS6Q14393 721 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 GEN1Q17RS7 908 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 Q6ZS52 159 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 SETD3Q86TU7 594 aaPredicted RBP13.64□□□□□ -0.23
CKAP2-202ENST00000378034 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 EPAS1Q99814 870 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 ELOVL2Q9NXB9 296 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 TBC1D30Q9Y2I9 924 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 SNX10Q9Y5X0 201 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 DOCK4Q8N1I0 1966 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
CKAP2-202ENST00000378034 LAMTOR5O43504 91 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
CKAP2-202ENST00000378034 CD70P32970 193 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 PLK1P53350 603 aa13.63□□□□□ -0.23
CKAP2-202ENST00000378034 SEC13P55735 322 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms