RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ADGRA2Q96PE1 1338 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 CNTNAP2Q9UHC6 1331 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 FSCN2O14926 492 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 CLOCKO15516 846 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 SULT1C4O75897 302 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 GABBR2O75899 941 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 RSL1D1O76021 490 aaKnown RBP15.92■□□□□ 0.14
FXN-201ENST00000377270 C6orf222P0C671 652 aaPredicted RBP15.92■□□□□ 0.14
FXN-201ENST00000377270 FGFR1P11362 822 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 IL32P24001 234 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 SGO2Q562F6 1265 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 SYDE1Q6ZW31 735 aaPredicted RBP15.92■□□□□ 0.14
FXN-201ENST00000377270 HEATR4Q86WZ0 1026 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 GIMAP5Q96F15 307 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 C1orf74Q96LT6 269 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 C9orf72Q96LT7 481 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 FAM161BQ96MY7 647 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 VPS35Q96QK1 796 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 C11orf70Q9BRQ4 267 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 R3HDMLQ9H3Y0 253 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 PLK2Q9NYY3 685 aa15.92■□□□□ 0.14
FXN-201ENST00000377270 SYCE1LA8MT33 242 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 CENPBD1B2RD01 187 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 MAFO75444 373 aaPredicted RBP15.91■□□□□ 0.14
FXN-201ENST00000377270 SRGAP2CP0DJJ0 459 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 RBP3P10745 1247 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 RARBP10826 455 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 ATF2P15336 505 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 CXCR2P25025 360 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 CHRNEQ04844 493 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 Q3C1V9 767 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 MON1BQ7L1V2 547 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 ANKRD13AQ8IZ07 590 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 ABRAQ8N0Z2 381 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 TAMM41Q96BW9 452 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 SENP1Q9P0U3 644 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 CFL2Q9Y281 166 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 MYOCOSA0A1B0GUC4 107 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 EXOC1LA0A1B0GW35 172 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 MAGEC1O60732 1142 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 TNFSF9P41273 254 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 POLD2P49005 469 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 CDK9P50750 372 aaKnown RBP15.91■□□□□ 0.14
FXN-201ENST00000377270 P2RX3P56373 397 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 TRIP13Q15645 432 aaPredicted RBP15.91■□□□□ 0.14
FXN-201ENST00000377270 LIN9Q5TKA1 542 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 RELL1Q8IUW5 271 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 C4orf33Q8N1A6 199 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 OSBPL8Q9BZF1 889 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 NEK6Q9HC98 313 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 IP6K2Q9UHH9 426 aa15.91■□□□□ 0.14
FXN-201ENST00000377270 NOSIPQ9Y314 301 aaKnown RBP15.91■□□□□ 0.14
FXN-201ENST00000377270 A0A0G2JND7 137 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 CST3P01034 146 aaPredicted RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 ABHD2P08910 425 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 PRKCAP17252 672 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 KRT15P19012 456 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 TBXAS1P24557 533 aaPredicted RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 GCAP28676 217 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 KRT6CP48668 564 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 COX10Q12887 443 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 METTL7BQ6UX53 244 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 DDI1Q8WTU0 396 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 MTMR12Q9C0I1 747 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 CCSER2Q9H7U1 834 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 ELP3Q9H9T3 547 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 SCINQ9Y6U3 715 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 SIN3BO75182 1162 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 DDNO94850 711 aaPredicted RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 PGK2P07205 417 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 THRAP10827 490 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 NOMO3P69849 1222 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 TRIM72Q6ZMU5 477 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 RIPOR1Q6ZS17 1223 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 LPCAT2Q7L5N7 544 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 SGF29Q96ES7 293 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 ABI2Q9NYB9 513 aaPredicted RBP15.9■□□□□ 0.14
FXN-201ENST00000377270 NEU2Q9Y3R4 380 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 RWDD3Q9Y3V2 267 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 WDR90Q96KV7 1748 aa15.9■□□□□ 0.14
FXN-201ENST00000377270 GOLGA8MH3BSY2 632 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 PROSCO94903 275 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 ESRRBO95718 433 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 NR1H2P55055 460 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 ZBTB16Q05516 673 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 OVGP1Q12889 678 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 GNA13Q14344 377 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 MAPK6Q16659 721 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 RGS21Q2M5E4 152 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 TRMT5Q32P41 509 aaKnown RBP15.89■□□□□ 0.13
FXN-201ENST00000377270 IGSF11Q5DX21 431 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 NEK5Q6P3R8 708 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 ZPBP2Q6X784 338 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 TDRPQ86YL5 185 aa15.89■□□□□ 0.13
FXN-201ENST00000377270 DEPDC4Q8N2C3 294 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms