RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TXNDC9O14530 226 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF865P0CJ78 1059 aaPredicted RBP17.63■□□□□ 0.41
TRIM27-201ENST00000377194 TSHRP16473 764 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 CRABP2P29373 138 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 PITX1P78337 314 aaPredicted RBP17.63■□□□□ 0.41
TRIM27-201ENST00000377194 MAP7Q14244 749 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 CCL14Q16627 93 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 DBN1Q16643 649 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 SFT2D3Q587I9 215 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 OSTM1Q86WC4 334 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 NETO2Q8NC67 525 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 TMPRSS4Q9NRS4 437 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 GDAP2Q9NXN4 497 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 CACNG4Q9UBN1 327 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF510Q9Y2H8 683 aa17.63■□□□□ 0.41
TRIM27-201ENST00000377194 CIB2O75838 187 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 BEST1O76090 585 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 CD4P01730 458 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 PABPC4LP0CB38 370 aaKnown RBP17.62■□□□□ 0.41
TRIM27-201ENST00000377194 DESP17661 470 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 GRIA1P42261 906 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 AP2B1P63010 937 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 C1QTNF12Q5T7M4 302 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 KCNT2Q6UVM3 1135 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 ULK2Q8IYT8 1036 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 NME8Q8N427 588 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 STKLD1Q8NE28 680 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 CSPG4P5Q96PW8 444 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 POPDC2Q9HBU9 364 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 SLC7A8Q9UHI5 535 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 CCDC160A6NGH7 325 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 MEI4A8MW99 385 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 CLDN5O00501 218 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 TGDSO95455 350 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 LILRA4P59901 499 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 XKR4Q5GH76 650 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 ZNF534Q76KX8 674 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 PIGZQ86VD9 579 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 FAM131BQ86XD5 332 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 SMG8Q8ND04 991 aaKnown RBP17.62■□□□□ 0.41
TRIM27-201ENST00000377194 SNX25Q9H3E2 840 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 TTLL3Q9Y4R7 772 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 IPPQ9Y573 584 aa17.62■□□□□ 0.41
TRIM27-201ENST00000377194 MAGEC1O60732 1142 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MT-ND3P03897 115 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 KCNE1P15382 129 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 GOT1P17174 413 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 SNX16P57768 344 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MORN1Q5T089 497 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 LIMS2Q7Z4I7 341 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 TMPRSS6Q8IU80 811 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 OR6Y1Q8NGX8 325 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 ALKBH8Q96BT7 664 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 SMYD2Q9NRG4 433 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 ZC3H7BQ9UGR2 993 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MYO18AQ92614 2054 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 F8W8V4 182 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 BUD23O43709 281 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 UGT1A9O60656 530 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 INHBAP08476 426 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 ACAT1P24752 427 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 ETV4P43268 484 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MAGEA6P43360 314 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 PSEN2P49810 448 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 TAF6P49848 677 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 DLG1Q12959 904 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■■□ 20.2
TRIM27-201ENST00000377194 ACAD11Q709F0 780 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 DEFB106AQ8N104 65 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MPP5Q8N3R9 675 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 GSTCDQ8NEC7 633 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 ZFP42Q96MM3 310 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 PHF12Q96QT6 1004 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 UGT1A7Q9HAW7 530 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 UGT1A10Q9HAW8 530 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 UGT1A8Q9HAW9 530 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 DTLQ9NZJ0 730 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 PPARGC1AQ9UBK2 798 aaKnown RBP17.61■□□□□ 0.41
TRIM27-201ENST00000377194 SCN4AP35499 1836 aa17.61■□□□□ 0.41
TRIM27-201ENST00000377194 MEIS3P2A8K0S8 358 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 HAS3O00219 553 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 DHRS4L1P0CG22 281 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 NDUFV1P49821 464 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 AQP4P55087 323 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 CBLBQ13191 982 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 TMED1Q13445 227 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 NCBP2-AS2Q69YL0 99 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 CTAGE3PQ8IX95 158 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 ADGRF2Q8IZF7 708 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 PPM1NQ8N819 430 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 MTBPQ96DY7 904 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 IL1RAPL1Q9NZN1 696 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 USP3Q9Y6I4 520 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 IKBKGQ9Y6K9 419 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 PDCD11Q14690 1871 aaKnown RBP17.6■□□□□ 0.41
TRIM27-201ENST00000377194 IQANK1A0A1B0GTG1 560 aa17.6■□□□□ 0.41
TRIM27-201ENST00000377194 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms