RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 C14orf80Q86SX3 495 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 TMEM25Q86YD3 366 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 RNF135Q8IUD6 432 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 RCOR2Q8IZ40 523 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 EXD1Q8NHP7 514 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 HES6Q96HZ4 224 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PRICKLE1Q96MT3 831 aaPredicted RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 CALN1Q9BXU9 219 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 C8orf33Q9H7E9 229 aaPredicted RBP13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 KLHL11Q9NVR0 708 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 SNX10Q9Y5X0 201 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 DOCK4Q8N1I0 1966 aa13.58□□□□□ -0.24
TIMP1-202ENST00000377017 PRUNE2Q8WUY3 3088 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FAM72CH0Y354 149 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 H0Y626 953 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 LUC7L3O95232 432 aaKnown RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 GLULP15104 373 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 RHOQP17081 205 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 KDELR1P24390 212 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 HOXC13P31276 330 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 OXCT1P55809 520 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 COPS2P61201 443 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 ZNF177Q13360 481 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 CDH18Q13634 790 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FAM72AQ5TYM5 149 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FYB2Q5VWT5 728 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FAM72DQ6L9T8 149 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 C1orf228Q6PIY5 440 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 RFX8Q6ZV50 586 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 ZSCAN30Q86W11 494 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FAM72BQ86X60 149 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 CCDC50Q8IVM0 306 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 MFN1Q8IWA4 741 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 UBALD2Q8IYN6 164 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 ZNF683Q8IZ20 524 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 CFAP52Q8N1V2 620 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 KRT35Q92764 455 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 BHMTQ93088 406 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 IGSF8Q969P0 613 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 MAK16Q9BXY0 300 aaKnown RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 SLC2A11Q9BYW1 496 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 PRDM16Q9HAZ2 1276 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 GTSE1Q9NYZ3 720 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 PACSIN2Q9UNF0 486 aaPredicted RBP13.57□□□□□ -0.24
TIMP1-202ENST00000377017 C5orf42Q9H799 3197 aa13.57□□□□□ -0.24
TIMP1-202ENST00000377017 MYOFQ9NZM1 2061 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 CACNG3O60359 315 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 GOT1P17174 413 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 GJA4P35212 333 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 EIF2DP41214 584 aaKnown RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 MAPKAPK2P49137 400 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 DNA2P51530 1060 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 SGSHP51688 502 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 ARSEP51690 589 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 DPYSL3Q14195 570 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 SEL1L2Q5TEA6 688 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 C17orf53Q8N3J3 647 aaPredicted RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 TSC1Q92574 1164 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 CSPG4P5Q96PW8 444 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 TMEM248Q9NWD8 314 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 MPP6Q9NZW5 540 aa13.56□□□□□ -0.24
TIMP1-202ENST00000377017 CWC15Q9P013 229 aaKnown RBP13.56□□□□□ -0.24
TIMP1-202ENST00000377017 WASH4PA8MWX3 477 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 PI4K2BG5E9Z4 385 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
TIMP1-202ENST00000377017 NARSO43776 548 aaKnown RBP13.55□□□□□ -0.24
TIMP1-202ENST00000377017 TUBB4AP04350 444 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 ZFXP17010 805 aaPredicted RBP13.55□□□□□ -0.24
TIMP1-202ENST00000377017 OR1E1P30953 314 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 SERPINB6P35237 376 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 MARCKSL1P49006 195 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 PEX5P50542 639 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 DPYSQ14117 519 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 TFDP2Q14188 446 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 ALFQ53S48 1182 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 TFDP3Q5H9I0 405 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 RNF43Q68DV7 783 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
TIMP1-202ENST00000377017 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms