RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 SCML4Q8N228 414 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 PCSK9Q8NBP7 692 aaKnown RBP22.28■■□□□ 1.16
RNF39-202ENST00000376751 UROC1Q96N76 676 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 NPHS2Q9NP85 383 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 KLHL8Q9P2G9 620 aaPredicted RBP22.28■■□□□ 1.16
RNF39-202ENST00000376751 RAD54BQ9Y620 910 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 USH1CQ9Y6N9 552 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 MYO16Q9Y6X6 1858 aa22.28■■□□□ 1.16
RNF39-202ENST00000376751 BGNP21810 368 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 SERPINB4P48594 390 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 GALNT2Q10471 571 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 OVGP1Q12889 678 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 ZBTB17Q13105 803 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 MBTPS1Q14703 1052 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 MROH9Q5TGP6 573 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 TRAF7Q6Q0C0 670 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 LINC01599Q8WXQ3 324 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 KANSL3Q9P2N6 904 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 NEU3Q9UQ49 428 aa22.27■■□□□ 1.16
RNF39-202ENST00000376751 INPPL1O15357 1258 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 KRT38O76015 456 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 IGLV3-25P01717 112 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 CD68P34810 354 aaPredicted RBP22.27■■□□□ 1.15
RNF39-202ENST00000376751 ACLYP53396 1101 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 CRYMQ14894 314 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 PLEKHG4Q58EX7 1191 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 DCLRE1AQ6PJP8 1040 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 PDZD4Q76G19 769 aaPredicted RBP22.27■■□□□ 1.15
RNF39-202ENST00000376751 MARK2Q7KZI7 788 aaKnown RBP22.27■■□□□ 1.15
RNF39-202ENST00000376751 ZNF280BQ86YH2 543 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 SMC1BQ8NDV3 1235 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 EPAS1Q99814 870 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 TRIM33Q9UPN9 1127 aa22.27■■□□□ 1.15
RNF39-202ENST00000376751 OR4Q2P0C623 313 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 PGAM1P18669 254 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 EPHB2P29323 1055 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 KCNJ2P63252 427 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 ELF3P78545 371 aaPredicted RBP22.26■■□□□ 1.15
RNF39-202ENST00000376751 SMAD1Q15797 465 aaKnown RBP22.26■■□□□ 1.15
RNF39-202ENST00000376751 LGSNQ5TDP6 509 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 CYS1Q717R9 158 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 TBC1D1Q86TI0 1168 aaPredicted RBP22.26■■□□□ 1.15
RNF39-202ENST00000376751 RFWD2Q8NHY2 731 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 MTBPQ96DY7 904 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 TRPV6Q9H1D0 765 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 PCMTD2Q9NV79 361 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 MKS1Q9NXB0 559 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 PLLPQ9Y342 182 aa22.26■■□□□ 1.15
RNF39-202ENST00000376751 ZBTB24O43167 697 aaPredicted RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 USP12O75317 370 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 DDHD2O94830 711 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 CKBP12277 381 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 SKIP12755 728 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 TYMPP19971 482 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 TSPY1Q01534 308 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 CLLU1OSQ5K130 101 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 OR52K1Q8NGK4 314 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 HDAC11Q96DB2 347 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 ERP27Q96DN0 273 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 CELF6Q96J87 481 aaKnown RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 AGAP3Q96P47 875 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 MLPHQ9BV36 600 aaPredicted RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 SLC13A1Q9BZW2 595 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 AOC2O75106 756 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 TOP3BO95985 862 aaKnown RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 ALDH1A1P00352 501 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 GARSP41250 739 aaKnown RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 SERPINB9P50453 376 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 SLC5A3P53794 718 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 EIF4EBP2Q13542 120 aaPredicted RBP22.25■■□□□ 1.15
RNF39-202ENST00000376751 CES3Q6UWW8 571 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 THEM5Q8N1Q8 247 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 APBB2Q92870 758 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 MECRQ9BV79 373 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 TSSK1BQ9BXA7 367 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 IL1RAPL1Q9NZN1 696 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 PCDHB8Q9UN66 801 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 PSAT1Q9Y617 370 aa22.25■■□□□ 1.15
RNF39-202ENST00000376751 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.24■■□□□ 1.15
RNF39-202ENST00000376751 TNFRSF10BO14763 440 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 NCAM2O15394 837 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 AP2A1O95782 977 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 MAP3K21Q5TCX8 1036 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 KIF2BQ8N4N8 673 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 DPF3Q92784 378 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 RNF34Q969K3 372 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 IQCGQ9H095 443 aaKnown RBP22.24■■□□□ 1.15
RNF39-202ENST00000376751 RGS18Q9NS28 235 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 NUMBLQ9Y6R0 609 aa22.24■■□□□ 1.15
RNF39-202ENST00000376751 CFAP73A6NFT4 308 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 IRAK2O43187 625 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 NQO1P15559 274 aaKnown RBP22.23■■□□□ 1.15
RNF39-202ENST00000376751 MAPRE1Q15691 268 aaKnown RBP22.23■■□□□ 1.15
RNF39-202ENST00000376751 ARTNQ5T4W7 220 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 FYB2Q5VWT5 728 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 CES4AQ5XG92 561 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 KCTD11Q693B1 232 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 PACS1Q6VY07 963 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 ASRGL1Q7L266 308 aa22.23■■□□□ 1.15
RNF39-202ENST00000376751 SCD5Q86SK9 330 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms