RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 KIF19Q2TAC6 998 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 RNF219Q5W0B1 726 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-202ENST00000376610 TTI2Q6NXR4 508 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 USP30Q70CQ3 517 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 ARHGEF19Q8IW93 802 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 LMO3Q8TAP4 145 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 TTC17Q96AE7 1141 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 BIRC7Q96CA5 298 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 FCRL2Q96LA5 508 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-202ENST00000376610 RSPH9Q9H1X1 276 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-202ENST00000376610 TM9SF3Q9HD45 589 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 TJP2Q9UDY2 1190 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 ANKRD6Q9Y2G4 727 aa19.16■□□□□ 0.66
HDAC6-202ENST00000376610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.16■□□□□ 0.66
HDAC6-202ENST00000376610 CALCAP01258 141 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 RPS24P62847 133 aaKnown RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 HNRNPA1L2Q32P51 320 aaKnown RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 MS4A13Q5J8X5 152 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 NADSYN1Q6IA69 706 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 KDM1BQ8NB78 822 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 SKA1Q96BD8 255 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 PRICKLE1Q96MT3 831 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 NUCKS1Q9H1E3 243 aaKnown RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 PABPC3Q9H361 631 aaKnown RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 FBXL12Q9NXK8 326 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 KIAA1522Q9P206 1035 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-202ENST00000376610 NAALADL1Q9UQQ1 740 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 SNX11Q9Y5W9 270 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 ACACAQ13085 2346 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 ATRXP46100 2492 aa19.15■□□□□ 0.66
HDAC6-202ENST00000376610 FAM47DPA6NHR8 397 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 SIN3BO75182 1162 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 LUC7L3O95232 432 aaKnown RBP19.14■□□□□ 0.65
HDAC6-202ENST00000376610 FGFR1OPO95684 399 aaKnown RBP19.14■□□□□ 0.65
HDAC6-202ENST00000376610 SRPRAP08240 638 aaKnown RBP19.14■□□□□ 0.65
HDAC6-202ENST00000376610 GPD2P43304 727 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 CCT8P50990 548 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 C21orf59P57076 290 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 PAK1Q13153 545 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 MEA1Q16626 185 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 INAVAQ3KP66 663 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 BEND5Q7L4P6 421 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 TRIM59Q8IWR1 403 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 DHX40Q8IX18 779 aaKnown RBP19.14■□□□□ 0.65
HDAC6-202ENST00000376610 ADAM32Q8TC27 787 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 STK32AQ8WU08 396 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 IGSF8Q969P0 613 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 MED15Q96RN5 788 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 OMDQ99983 421 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 INTS2Q9H0H0 1204 aaKnown RBP19.14■□□□□ 0.65
HDAC6-202ENST00000376610 SLC12A6Q9UHW9 1150 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 TMEM131Q92545 1883 aa19.14■□□□□ 0.65
HDAC6-202ENST00000376610 DSPP15924 2871 aaKnown RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 EDDM13A0A1B0GTR0 161 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 TARSL2A2RTX5 802 aaKnown RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 LRRC72A6NJI9 287 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 PPP1R3GB7ZBB8 358 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 DFNA5O60443 496 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 LETM1O95202 739 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 FYNP06241 537 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 NNMTP40261 264 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 GRK6P43250 576 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 RPL34P49207 117 aaKnown RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 STX17P56962 302 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 SCAPQ12770 1279 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 MORC3Q14149 939 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 CST6Q15828 149 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 DCAF6Q58WW2 860 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 PITRM1Q5JRX3 1037 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 KIAA0895LQ68EN5 471 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 CCNI2Q6ZMN8 369 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 DBX2Q6ZNG2 339 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 ENOSF1Q7L5Y1 443 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 SLCO6A1Q86UG4 719 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 TAC4Q86UU9 113 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 CHSY1Q86X52 802 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 PROSER1Q86XN7 944 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 LGI2Q8N0V4 545 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 CFAP52Q8N1V2 620 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 SLC39A13Q96H72 371 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 LMLNQ96KR4 655 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 BTN2A3PQ96KV6 586 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 FAM81BQ96LP2 452 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 KREMEN1Q96MU8 473 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 ACE2Q9BYF1 805 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 MTG2Q9H4K7 406 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 POPDC2Q9HBU9 364 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 UBE2TQ9NPD8 197 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 ERVW-1Q9UQF0 538 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 SLCO1B1Q9Y6L6 691 aa19.13■□□□□ 0.65
HDAC6-202ENST00000376610 GOLGA4Q13439 2230 aaKnown RBP19.13■□□□□ 0.65
HDAC6-202ENST00000376610 F5H5T6 163 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 BIN1O00499 593 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 THAP12O43422 761 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 RNASEH2AO75792 299 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 GNA15P30679 374 aa19.12■□□□□ 0.65
HDAC6-202ENST00000376610 MARSP56192 900 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 YWHAZP63104 245 aaKnown RBP19.12■□□□□ 0.65
HDAC6-202ENST00000376610 RACK1P63244 317 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms