RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 XAB2Q9HCS7 855 aaKnown RBP12.85□□□□□ -0.35
SPIN1-201ENST00000375859 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 RPS6KL1Q9Y6S9 549 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 COPEO14579 308 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 OPHN1O60890 802 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 CYP11A1P05108 521 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 NFKB1P19838 968 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 MX2P20592 715 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 DNAJB2P25686 324 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 FDFT1P37268 417 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 SLC11A1P49279 550 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 SLC17A7Q9P2U7 560 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 HACD1B0YJ81 288 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 TCEA3O75764 348 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 APOEP02649 317 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 TYMPP19971 482 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
SPIN1-201ENST00000375859 PCSK7Q16549 785 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SPIN1-201ENST00000375859 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 PABPC5Q96DU9 382 aaKnown RBP12.85□□□□□ -0.35
SPIN1-201ENST00000375859 CDY1Q9Y6F8 540 aa12.85□□□□□ -0.35
SPIN1-201ENST00000375859 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 PMPCBO75439 489 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 OVGP1Q12889 678 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 PSMD5Q16401 504 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 FAM26DQ5JW98 314 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 TMEM173Q86WV6 379 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 NT5C3BQ969T7 300 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 TSEN34Q9BSV6 310 aaKnown RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 RCOR3Q9P2K3 495 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 USP3Q9Y6I4 520 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 DGKIO75912 1065 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 PTPN3P26045 913 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 CXCR3P49682 368 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 TAF10Q12962 218 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 DPYSQ14117 519 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 FUT10Q6P4F1 479 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 PPP1R14CQ8TAE6 165 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 DCLK1O15075 740 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ERVK-10P10266 1014 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 YWHAQP27348 245 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 CDKL2Q92772 493 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ZNF317Q96PQ6 595 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 CSNK1G1Q9HCP0 422 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 BFARQ9NZS9 450 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 E7ESA3 106 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 IRAK2O43187 625 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ETFBP38117 255 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 RASSF3Q86WH2 238 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SPATA22Q8NHS9 363 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 GSDMBQ8TAX9 411 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 CKAP2Q8WWK9 683 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SERAC1Q96JX3 654 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SLC9A7Q96T83 725 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SENP1Q9P0U3 644 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
SPIN1-201ENST00000375859 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-201ENST00000375859 SUN1O94901 812 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 FOXN2P32314 431 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 TBX4P57082 545 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 ZBTB17Q13105 803 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 SEPT6Q14141 434 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 PRPSAP1Q14558 356 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 PARP6Q2NL67 630 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 SCD5Q86SK9 330 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 PSTKQ8IV42 348 aaKnown RBP12.83□□□□□ -0.36
SPIN1-201ENST00000375859 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
SPIN1-201ENST00000375859 DCAKDQ8WVC6 231 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 SF3B1O75533 1304 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■■■■■ 83.6
SPIN1-201ENST00000375859 KRT38O76015 456 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 TLE2Q04725 743 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 RTP2Q5QGT7 225 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 CIR1Q86X95 450 aaPredicted RBP12.83□□□□□ -0.36
SPIN1-201ENST00000375859 NTAN1Q96AB6 310 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 OLFM3Q96PB7 478 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 TRIM62Q9BVG3 475 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
SPIN1-201ENST00000375859 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms