RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SCN10AQ9Y5Y9 1956 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 CAPN9O14815 690 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 EDF1O60869 148 aaKnown RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 MAGEA3P43357 314 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 DAOAP59103 153 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 MGAT3Q09327 533 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SEMA5AQ13591 1074 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 WASHC2DQ5SRD0 308 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 UNC5AQ6ZN44 842 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 C4orf50Q6ZRC1 276 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 CTU1Q7Z7A3 348 aaKnown RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 KBTBD2Q8IY47 623 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SLC7A14Q8TBB6 771 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 LRRC39Q96DD0 335 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 DCLRE1BQ9H816 532 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 I3L4J1 428 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 GPR182O15218 404 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TM9SF1O15321 606 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 UBTFL6P0CB48 400 aaPredicted RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 ZCCHC18P0CG32 403 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 PRKCHP24723 683 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 GSTT1P30711 240 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 ERFP50548 548 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 AP1B1Q10567 949 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TRIM32Q13049 653 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 CCDC6Q16204 474 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 ACSBG2Q5FVE4 666 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 SH2D5Q6ZV89 423 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 LRRC6Q86X45 466 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 ZNF276Q8N554 614 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 COLGALT1Q8NBJ5 622 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 EBNA1BP2Q99848 306 aaKnown RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 SPC25Q9HBM1 224 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 LRCH1Q9Y2L9 728 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 USH1CQ9Y6N9 552 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 A0A0A0MRY4 1105 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 LPXNO60711 386 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TBX10O75333 385 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 FBXO21O94952 628 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 APOEP02649 317 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 ADRA1BP35368 520 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 THPOP40225 353 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 VHLP40337 213 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 SCNN1BP51168 640 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 SLC18A2Q05940 514 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TTC39BQ5VTQ0 682 aaPredicted RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 MRPL10Q7Z7H8 261 aaKnown RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 P2RY11Q96G91 374 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 SPATA13Q96N96 652 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 CADM1Q9BY67 442 aaKnown RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
MSH5-202ENST00000375740 PRDM16Q9HAZ2 1276 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 ANLNQ9NQW6 1124 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 TSC2P49815 1807 aa14.37□□□□□ -0.11
MSH5-202ENST00000375740 FAM72CH0Y354 149 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 MGEA5O60502 916 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 UGT1A9O60656 530 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 ATP5HO75947 161 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 CD52P31358 61 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 RPL9P32969 192 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 UPP1Q16831 310 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 LRRC23Q53EV4 343 aaPredicted RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 PLEKHG4Q58EX7 1191 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 FAM72AQ5TYM5 149 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 FAM72DQ6L9T8 149 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 FAM72BQ86X60 149 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 TP53INP2Q8IXH6 220 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 CCNYQ8ND76 341 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 GATA6Q92908 595 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 CEP41Q9BYV8 373 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 RHOBTB2Q9BYZ6 727 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 UGT1A7Q9HAW7 530 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 UGT1A10Q9HAW8 530 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 UGT1A8Q9HAW9 530 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 ALG13Q9NP73 1137 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 PADI3Q9ULW8 664 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 TRIM49D1C9J1S8 452 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 RNF103O00237 685 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 POMCP01189 267 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 GSTA2P09210 222 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 NCAM1P13591 858 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 DPYSQ14117 519 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 KPNB1Q14974 876 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 PRKD1Q15139 912 aaPredicted RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 RAB41Q5JT25 222 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 TRMT10BQ6PF06 316 aaKnown RBP14.36□□□□□ -0.11
MSH5-202ENST00000375740 RFX8Q6ZV50 586 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 OTOAQ7RTW8 1153 aa14.36□□□□□ -0.11
MSH5-202ENST00000375740 PDCD7Q8N8D1 485 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms