RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CXCL9Q07325 125 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 KYAT3Q6YP21 454 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF570Q96NI8 536 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 DDX43Q9NXZ2 648 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 LGALS13Q9UHV8 139 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 AAR2Q9Y312 384 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 C2CD2LO14523 706 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 C4BPAP04003 597 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 SERPINA6P08185 405 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ADSSP30520 456 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 YWHAZP63104 245 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 GAD2Q05329 585 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 KHDC1Q4VXA5 237 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 PLEKHA7Q6IQ23 1121 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 DNAJB3Q8WWF6 145 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ARAP2Q8WZ64 1704 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CYP3A43Q9HB55 503 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 APOBEC3GQ9HC16 384 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 AGRPO00253 132 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 STRNO43815 780 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 VAPBO95292 243 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 FOXR2Q6PJQ5 311 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CMC1Q7Z7K0 106 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 AMIGO3Q86WK7 504 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 DHFR2Q86XF0 187 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MID1IP1Q9NPA3 183 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CYLDQ9NQC7 956 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CLIC5Q9NZA1 410 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 FAM95CA0A1B0GW59 222 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 VNN1O95497 513 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 EFEMP1Q12805 493 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 RALGPS1Q5JS13 557 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 TREML2Q5T2D2 321 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 RNASEH2BQ5TBB1 312 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 REPS2Q8NFH8 660 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MAGEC3Q8TD91 643 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CPXM1Q96SM3 734 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 AK5Q9Y6K8 562 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ALOX15BO15296 676 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 DLGAP3O95886 979 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CYP2B6P20813 491 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 EPHA3P29320 983 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 TMEM132BQ14DG7 1078 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 RMND5BQ96G75 393 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CADM1Q9BY67 442 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ASPSCR1Q9BZE9 553 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CRYL1Q9Y2S2 319 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ZC3H4Q9UPT8 1303 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ADM5C9JUS6 153 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MPSTP25325 297 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 GP5P40197 560 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MGAT5BQ3V5L5 792 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 GK5Q6ZS86 529 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MIB1Q86YT6 1006 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 CLVS1Q8IUQ0 354 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 KIAA2013Q8IYS2 634 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 FBXW8Q8N3Y1 598 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 DNERQ8NFT8 737 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MTFMTQ96DP5 389 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 B3GNT5Q9BYG0 378 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 GPR88Q9GZN0 384 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 RUBCNLQ9H714 662 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 SNX15Q9NRS6 342 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 NUDT5Q9UKK9 219 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 TSC22D4Q9Y3Q8 395 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 NR2E3Q9Y5X4 410 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 YDJCA8MPS7 323 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MAN1A2O60476 641 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 SLC25A27O95847 323 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 GSSP48637 474 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 STX5Q13190 355 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 FBXO47Q5MNV8 452 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 PARP8Q8N3A8 854 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 KCTD4Q8WVF5 259 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 APBB2Q92870 758 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 ASIC4Q96FT7 647 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
SMC1A-202ENST00000375340 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 PALMDQ9NP74 551 aa6.68□□□□□ -1.34
SMC1A-202ENST00000375340 LIN7AO14910 233 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TADA2AO75478 443 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 FKBP9O95302 570 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TNFAIP8O95379 198 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 GUCA1CO95843 209 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 LRPAP1P30533 357 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ACVR2BQ13705 512 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 KCTD21Q4G0X4 260 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 FKBP9P1Q75LS8 142 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 RBM15BQ8NDT2 890 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 OTULINQ96BN8 352 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SMAD5Q99717 465 aaKnown RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 CDH19Q9H159 772 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 MMADHCQ9H3L0 296 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ALG9Q9H6U8 611 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 SLC38A7Q9NVC3 462 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 ACOT9Q9Y305 439 aa6.67□□□□□ -1.34
SMC1A-202ENST00000375340 TMEM191CA6NGB0 347 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms